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OPENSEQ.org

ERPA - YGDK
UniProt: P0ACC3 - P0AGF2
Length: 261
Sequences: 146
Seq/Len: 0.60
I_Prob: 0.02

ERPA - Iron-sulfur cluster insertion protein ErpA
Paralog alert: 0.68 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ERPA ISCA SUFA
YGDK - Uncharacterized SufE-like protein YgdK
Paralog alert: 0.43 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SUFE YGDK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
86_Y 21_R 1.71 0.02
97_V 44_L 1.46 0.01
86_Y 74_N 1.43 0.01
9_L 79_F 1.37 0.01
40_G 119_L 1.36 0.01
33_L 81_G 1.28 0.01
30_N 33_K 1.23 0.01
86_Y 37_L 1.22 0.01
103_K 39_M 1.20 0.01
95_F 24_F 1.20 0.01
75_S 95_L 1.17 0.00
103_K 58_I 1.15 0.00
74_M 46_A 1.15 0.00
24_A 55_A 1.15 0.00
103_K 67_L 1.13 0.00
17_N 29_Q 1.11 0.00
37_I 136_L 1.11 0.00
54_Q 18_E 1.11 0.00
86_Y 50_E 1.09 0.00
83_S 37_L 1.09 0.00
26_E 77_M 1.08 0.00
43_S 126_S 1.08 0.00
13_D 50_E 1.07 0.00
68_G 73_E 1.06 0.00
30_N 103_T 1.06 0.00
48_G 22_N 1.06 0.00
93_S 32_D 1.05 0.00
66_G 54_Q 1.05 0.00
113_S 125_L 1.04 0.00
13_D 119_L 1.03 0.00
40_G 120_G 1.03 0.00
19_V 20_L 1.02 0.00
68_G 71_V 1.01 0.00
13_D 74_N 1.01 0.00
67_V 108_Q 1.00 0.00
65_Q 94_V 0.99 0.00
84_V 146_Q 0.99 0.00
34_R 28_T 0.98 0.00
19_V 24_F 0.98 0.00
13_D 103_T 0.97 0.00
104_S 126_S 0.97 0.00
63_E 24_F 0.96 0.00
98_T 79_F 0.96 0.00
49_F 33_K 0.96 0.00
26_E 18_E 0.95 0.00
114_I 106_E 0.95 0.00
78_Y 120_G 0.94 0.00
114_I 112_P 0.94 0.00
67_V 98_A 0.94 0.00
103_K 21_R 0.94 0.00
82_G 107_L 0.93 0.00
79_L 128_S 0.93 0.00
68_G 105_A 0.93 0.00
61_T 142_A 0.93 0.00
96_I 102_K 0.92 0.00
23_I 104_A 0.92 0.00
14_A 18_E 0.92 0.00
105_T 119_L 0.92 0.00
10_E 77_M 0.92 0.00
62_I 24_F 0.92 0.00
45_F 32_D 0.92 0.00
32_K 98_A 0.91 0.00
52_D 118_E 0.91 0.00
14_A 106_E 0.91 0.00
21_S 55_A 0.91 0.00
113_S 39_M 0.91 0.00
84_V 80_F 0.90 0.00
35_V 95_L 0.90 0.00
9_L 118_E 0.90 0.00
37_I 94_V 0.90 0.00
58_G 74_N 0.90 0.00
59_D 141_I 0.89 0.00
92_G 95_L 0.89 0.00
113_S 126_S 0.89 0.00
19_V 49_D 0.89 0.00
92_G 31_E 0.89 0.00
29_P 101_G 0.89 0.00
68_G 50_E 0.88 0.00
24_A 75_G 0.88 0.00
95_F 27_L 0.88 0.00
34_R 37_L 0.88 0.00
71_V 45_P 0.88 0.00
57_E 104_A 0.88 0.00
43_S 52_K 0.88 0.00
96_I 67_L 0.88 0.00
24_A 54_Q 0.88 0.00
50_T 21_R 0.87 0.00
34_R 122_R 0.87 0.00
58_G 77_M 0.86 0.00
104_S 80_F 0.86 0.00
86_Y 87_I 0.85 0.00
83_S 77_M 0.85 0.00
100_P 30_W 0.85 0.00
76_L 146_Q 0.84 0.00
35_V 91_L 0.84 0.00
52_D 21_R 0.84 0.00
56_N 101_G 0.84 0.00
65_Q 91_L 0.83 0.00
81_G 44_L 0.83 0.00
87_T 20_L 0.83 0.00
22_L 131_Q 0.83 0.00
62_I 115_L 0.83 0.00
19_V 100_E 0.83 0.00
58_G 73_E 0.82 0.00
98_T 57_E 0.82 0.00
114_I 95_L 0.82 0.00
61_T 53_A 0.81 0.00
104_S 51_L 0.81 0.00
46_Q 64_R 0.81 0.00
90_L 120_G 0.81 0.00
81_G 126_S 0.81 0.00
66_G 32_D 0.81 0.00
83_S 12_G 0.81 0.00
103_K 111_S 0.81 0.00
37_I 64_R 0.80 0.00
35_V 123_A 0.80 0.00
84_V 117_D 0.80 0.00
64_K 94_V 0.80 0.00
89_G 128_S 0.80 0.00
54_Q 21_R 0.80 0.00
37_I 81_G 0.80 0.00
24_A 77_M 0.80 0.00
16_A 101_G 0.79 0.00
26_E 59_A 0.79 0.00
105_T 100_E 0.79 0.00
53_D 52_K 0.79 0.00
66_G 98_A 0.78 0.00
82_G 40_L 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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