| UniProt: | P0AAC8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12132 | ||
| Length: | 107 (106) | ||
| Sequences: | 2017 | ||
| Seq/Len: | 19.03 |
| ISCA
Paralog alert: 0.68 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: ERPA ISCA SUFA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 76_Q | 91_T | 4.095 | 1.00 | |
| 12_R | 15_T | 3.122 | 1.00 | |
| 65_D | 68_S | 2.699 | 1.00 | |
| 56_E | 61_K | 2.619 | 1.00 | |
| 54_V | 61_K | 2.603 | 1.00 | |
| 29_G | 41_V | 2.585 | 1.00 | |
| 4_T | 76_Q | 2.494 | 1.00 | |
| 95_V | 98_E | 2.453 | 1.00 | |
| 7_D | 58_K | 2.408 | 1.00 | |
| 10_A | 58_K | 2.293 | 1.00 | |
| 25_G | 63_V | 2.205 | 1.00 | |
| 56_E | 59_G | 2.105 | 1.00 | |
| 7_D | 57_D | 1.903 | 1.00 | |
| 6_S | 78_D | 1.866 | 1.00 | |
| 27_R | 52_D | 1.822 | 1.00 | |
| 48_P | 63_V | 1.812 | 1.00 | |
| 75_T | 90_F | 1.728 | 1.00 | |
| 25_G | 61_K | 1.699 | 1.00 | |
| 81_K | 86_E | 1.65 | 1.00 | |
| 14_N | 18_A | 1.533 | 1.00 | |
| 22_K | 46_D | 1.515 | 1.00 | |
| 31_R | 41_V | 1.514 | 1.00 | |
| 3_I | 77_L | 1.478 | 1.00 | |
| 87_G | 90_F | 1.45 | 1.00 | |
| 97_D | 106_H | 1.331 | 0.99 | |
| 69_L | 73_D | 1.264 | 0.99 | |
| 13_V | 26_L | 1.231 | 0.98 | |
| 11_A | 14_N | 1.224 | 0.98 | |
| 14_N | 59_G | 1.193 | 0.98 | |
| 48_P | 54_V | 1.171 | 0.98 | |
| 8_S | 78_D | 1.166 | 0.97 | |
| 82_E | 89_K | 1.16 | 0.97 | |
| 15_T | 18_A | 1.136 | 0.97 | |
| 75_T | 103_E | 1.125 | 0.97 | |
| 36_S | 106_H | 1.118 | 0.96 | |
| 70_Q | 73_D | 1.111 | 0.96 | |
| 83_G | 88_F | 1.093 | 0.96 | |
| 5_L | 13_V | 1.085 | 0.96 | |
| 53_I | 69_L | 1.069 | 0.95 | |
| 6_S | 9_A | 1.063 | 0.95 | |
| 33_S | 83_G | 1.048 | 0.94 | |
| 80_V | 85_N | 1.044 | 0.94 | |
| 38_M | 71_F | 1.043 | 0.94 | |
| 66_G | 70_Q | 1.032 | 0.94 | |
| 12_R | 16_F | 1.032 | 0.94 | |
| 55_F | 69_L | 1.031 | 0.94 | |
| 67_K | 70_Q | 1.009 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2d2aA | 2 | 1 | 100 | 0.028 | Contact Map | 0.781 |
| 1r94A | 2 | 1 | 100 | 0.052 | Contact Map | 0.758 |
| 1nwbA | 1 | 1 | 100 | 0.06 | Contact Map | 0.564 |
| 1x0gA | 4 | 0.9907 | 100 | 0.069 | Contact Map | 0.839 |
| 2apnA | 1 | 1 | 100 | 0.071 | Contact Map | 0.556 |
| 2k4zA | 1 | 0.9626 | 99.9 | 0.244 | Contact Map | 0.7 |
| 2p2eA | 1 | 0.9626 | 99.9 | 0.37 | Contact Map | 0.457 |
| 2qgoA | 1 | 0.9533 | 99.8 | 0.393 | Contact Map | 0.468 |
| 2nncA | 2 | 0.3458 | 9.1 | 0.927 | Contact Map | 0.213 |
| 3butA | 1 | 0.3551 | 6.1 | 0.932 | Contact Map | 0.026 |
Sequence Conservation (Image Generated using WebLogo v3)