| UniProt: | P77667 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11378 | ||
| Length: | 122 (107) | ||
| Sequences: | 2006 | ||
| Seq/Len: | 18.75 |
| SUFA
Paralog alert: 0.68 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: ERPA ISCA SUFA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 91_E | 106_H | 3.98 | 1.00 | |
| 27_H | 30_E | 3.196 | 1.00 | |
| 80_P | 83_A | 2.826 | 1.00 | |
| 44_G | 56_V | 2.644 | 1.00 | |
| 71_E | 76_K | 2.629 | 1.00 | |
| 19_T | 91_E | 2.588 | 1.00 | |
| 69_L | 76_K | 2.58 | 1.00 | |
| 110_A | 113_E | 2.463 | 1.00 | |
| 22_P | 73_D | 2.422 | 1.00 | |
| 25_A | 73_D | 2.254 | 1.00 | |
| 40_G | 78_F | 2.179 | 1.00 | |
| 71_E | 74_G | 1.977 | 1.00 | |
| 63_P | 78_F | 1.935 | 1.00 | |
| 21_T | 93_D | 1.845 | 1.00 | |
| 22_P | 72_H | 1.754 | 1.00 | |
| 90_T | 105_F | 1.747 | 1.00 | |
| 96_R | 101_Q | 1.695 | 1.00 | |
| 40_G | 76_K | 1.642 | 1.00 | |
| 102_I | 105_F | 1.61 | 1.00 | |
| 29_R | 33_A | 1.609 | 1.00 | |
| 46_K | 56_V | 1.585 | 1.00 | |
| 42_R | 67_D | 1.571 | 1.00 | |
| 18_L | 92_V | 1.491 | 1.00 | |
| 112_N | 121_G | 1.329 | 0.99 | |
| 37_G | 61_S | 1.288 | 0.99 | |
| 84_M | 88_D | 1.26 | 0.99 | |
| 23_A | 93_D | 1.256 | 0.99 | |
| 29_R | 74_G | 1.247 | 0.99 | |
| 28_I | 41_V | 1.237 | 0.98 | |
| 26_I | 29_R | 1.22 | 0.98 | |
| 97_E | 104_K | 1.157 | 0.97 | |
| 53_F | 86_F | 1.156 | 0.97 | |
| 63_P | 69_L | 1.117 | 0.96 | |
| 85_P | 88_D | 1.116 | 0.96 | |
| 48_T | 98_G | 1.11 | 0.96 | |
| 82_Q | 85_P | 1.105 | 0.96 | |
| 98_G | 103_F | 1.085 | 0.96 | |
| 21_T | 24_A | 1.072 | 0.95 | |
| 51_A | 121_G | 1.065 | 0.95 | |
| 27_H | 31_L | 1.06 | 0.95 | |
| 95_V | 100_N | 1.046 | 0.94 | |
| 20_L | 28_I | 1.037 | 0.94 | |
| 90_T | 118_E | 1.029 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2d2aA | 2 | 1 | 100 | 0.102 | Contact Map | 0.784 |
| 1nwbA | 1 | 0.9344 | 100 | 0.188 | Contact Map | 0.567 |
| 1r94A | 2 | 0.877 | 100 | 0.188 | Contact Map | 0.771 |
| 1x0gA | 4 | 0.8689 | 100 | 0.193 | Contact Map | 0.856 |
| 2apnA | 1 | 0.9262 | 100 | 0.206 | Contact Map | 0.574 |
| 2k4zA | 1 | 0.9672 | 99.9 | 0.362 | Contact Map | 0.71 |
| 2p2eA | 1 | 0.8607 | 99.8 | 0.469 | Contact Map | 0.456 |
| 2qgoA | 1 | 0.8607 | 99.8 | 0.491 | Contact Map | 0.501 |
| 4g06A | 2 | 0.2869 | 13.8 | 0.929 | Contact Map | 0.883 |
| 3riqA | 1 | 0.4672 | 9.5 | 0.934 | Contact Map | 0.349 |
Sequence Conservation (Image Generated using WebLogo v3)