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OPENSEQ.org

TOLR - YBGC
UniProt: P0ABV6 - P0A8Z3
Length: 276
Sequences: 439
Seq/Len: 1.64
I_Prob: 0.10

TOLR - Protein TolR
Paralog alert: 0.79 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: EXBD TOLR
YBGC - Acyl-CoA thioester hydrolase YbgC
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FADM YBGC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_L 92_F 1.41 0.10
45_V 35_A 1.28 0.07
14_S 27_S 1.23 0.06
43_V 35_A 1.19 0.05
103_P 8_W 1.19 0.05
35_T 19_A 1.12 0.04
115_V 66_Y 1.07 0.04
39_I 128_I 1.04 0.03
21_L 111_V 1.02 0.03
89_E 130_A 0.99 0.03
29_L 44_H 0.98 0.03
140_Q 97_V 0.97 0.02
116_P 128_I 0.96 0.02
66_V 112_V 0.94 0.02
89_E 10_V 0.93 0.02
139_T 37_T 0.92 0.02
31_I 47_Q 0.91 0.02
135_V 29_V 0.91 0.02
122_K 91_V 0.88 0.02
123_A 95_R 0.87 0.02
115_V 128_I 0.87 0.02
132_V 80_T 0.86 0.02
88_P 78_I 0.86 0.02
46_D 115_D 0.86 0.02
114_D 63_T 0.85 0.02
121_I 24_Y 0.85 0.02
137_L 94_Q 0.84 0.02
127_L 35_A 0.84 0.02
18_I 113_C 0.83 0.01
81_D 103_L 0.83 0.01
103_P 123_A 0.83 0.01
34_A 88_T 0.83 0.01
33_M 94_Q 0.82 0.01
86_L 88_T 0.82 0.01
40_T 45_F 0.82 0.01
97_S 117_L 0.82 0.01
127_L 27_S 0.82 0.01
30_L 98_N 0.80 0.01
116_P 124_L 0.80 0.01
136_G 92_F 0.80 0.01
62_P 10_V 0.80 0.01
111_G 47_Q 0.80 0.01
129_S 75_M 0.80 0.01
14_S 11_R 0.79 0.01
40_T 37_T 0.78 0.01
110_G 98_N 0.78 0.01
66_V 95_R 0.78 0.01
51_T 124_L 0.78 0.01
139_T 14_Y 0.78 0.01
62_P 102_T 0.77 0.01
123_A 39_M 0.77 0.01
37_P 34_R 0.77 0.01
18_I 120_K 0.77 0.01
91_V 132_F 0.77 0.01
119_E 45_F 0.77 0.01
63_P 31_F 0.76 0.01
135_V 8_W 0.76 0.01
135_V 108_E 0.76 0.01
54_Q 100_E 0.76 0.01
46_D 81_E 0.74 0.01
66_V 116_P 0.74 0.01
78_V 43_H 0.74 0.01
46_D 37_T 0.74 0.01
130_A 25_H 0.74 0.01
68_V 71_R 0.74 0.01
38_I 49_A 0.74 0.01
78_V 97_V 0.73 0.01
100_K 111_V 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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