| UniProt: | P0A8Z3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11110 | ||
| Length: | 134 (129) | ||
| Sequences: | 3475 | ||
| Seq/Len: | 26.94 |
| YBGC
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs Cluster includes: FADM YBGC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 61_K | 65_E | 3.815 | 1.00 | |
| 70_A | 76_L | 2.662 | 1.00 | |
| 32_Y | 107_A | 2.575 | 1.00 | |
| 70_A | 104_L | 2.449 | 1.00 | |
| 7_R | 77_E | 2.364 | 1.00 | |
| 68_A | 102_T | 2.328 | 1.00 | |
| 63_T | 108_E | 2.322 | 1.00 | |
| 9_P | 75_M | 2.296 | 1.00 | |
| 79_Q | 95_R | 2.21 | 1.00 | |
| 67_Y | 106_E | 2.177 | 1.00 | |
| 83_T | 93_T | 2.125 | 1.00 | |
| 27_S | 30_A | 2.114 | 1.00 | |
| 29_V | 64_V | 2.08 | 1.00 | |
| 29_V | 62_M | 2.059 | 1.00 | |
| 7_R | 79_Q | 2.036 | 1.00 | |
| 9_P | 77_E | 1.883 | 1.00 | |
| 32_Y | 105_N | 1.868 | 1.00 | |
| 69_P | 119_M | 1.829 | 1.00 | |
| 115_D | 118_K | 1.828 | 1.00 | |
| 94_Q | 109_V | 1.778 | 1.00 | |
| 81_E | 93_T | 1.762 | 1.00 | |
| 35_A | 80_T | 1.681 | 1.00 | |
| 65_E | 106_E | 1.635 | 1.00 | |
| 64_V | 105_N | 1.586 | 1.00 | |
| 126_K | 130_A | 1.583 | 1.00 | |
| 74_D | 98_N | 1.549 | 1.00 | |
| 84_S | 91_V | 1.543 | 1.00 | |
| 88_T | 121_P | 1.541 | 1.00 | |
| 95_R | 103_L | 1.534 | 1.00 | |
| 86_R | 89_S | 1.526 | 1.00 | |
| 97_V | 103_L | 1.524 | 1.00 | |
| 91_V | 108_E | 1.51 | 1.00 | |
| 79_Q | 97_V | 1.503 | 1.00 | |
| 95_R | 106_E | 1.465 | 1.00 | |
| 13_Y | 16_D | 1.458 | 1.00 | |
| 33_E | 36_R | 1.422 | 1.00 | |
| 11_R | 41_R | 1.389 | 0.99 | |
| 23_V | 31_F | 1.389 | 0.99 | |
| 78_I | 96_I | 1.384 | 0.99 | |
| 35_A | 78_I | 1.382 | 0.99 | |
| 15_E | 30_A | 1.353 | 0.99 | |
| 32_Y | 96_I | 1.334 | 0.99 | |
| 11_R | 75_M | 1.299 | 0.99 | |
| 12_V | 31_F | 1.229 | 0.98 | |
| 56_A | 116_P | 1.218 | 0.98 | |
| 11_R | 38_E | 1.214 | 0.98 | |
| 58_V | 114_V | 1.211 | 0.98 | |
| 16_D | 30_A | 1.192 | 0.98 | |
| 81_E | 95_R | 1.176 | 0.98 | |
| 62_M | 109_V | 1.172 | 0.98 | |
| 91_V | 110_L | 1.168 | 0.97 | |
| 49_A | 52_A | 1.166 | 0.97 | |
| 38_E | 42_H | 1.162 | 0.97 | |
| 67_Y | 103_L | 1.15 | 0.97 | |
| 83_T | 108_E | 1.137 | 0.97 | |
| 89_S | 110_L | 1.135 | 0.97 | |
| 125_P | 128_I | 1.122 | 0.97 | |
| 129_V | 133_K | 1.103 | 0.96 | |
| 26_A | 30_A | 1.062 | 0.95 | |
| 32_Y | 64_V | 1.058 | 0.95 | |
| 61_K | 110_L | 1.058 | 0.95 | |
| 88_T | 112_V | 1.044 | 0.94 | |
| 127_S | 130_A | 1.036 | 0.94 | |
| 41_R | 73_D | 1.034 | 0.94 | |
| 8_W | 38_E | 1.03 | 0.94 | |
| 25_H | 62_M | 1.029 | 0.94 | |
| 87_G | 123_A | 1.028 | 0.94 | |
| 16_D | 31_F | 1.014 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ownA | 2 | 1 | 100 | 0.172 | Contact Map | 0.757 |
| 2essA | 1 | 1 | 100 | 0.188 | Contact Map | 0.63 |
| 4gakA | 1 | 0.9925 | 100 | 0.189 | Contact Map | 0.766 |
| 2w3xA | 6 | 1 | 100 | 0.217 | Contact Map | 0.899 |
| 3ck1A | 2 | 0.9925 | 100 | 0.222 | Contact Map | 0.784 |
| 2hljA | 1 | 0.9925 | 100 | 0.222 | Contact Map | 0.704 |
| 1s5uA | 8 | 1 | 100 | 0.223 | Contact Map | 0.928 |
| 2gf6A | 4 | 0.9851 | 100 | 0.224 | Contact Map | 0.782 |
| 2hx5A | 1 | 0.9925 | 99.9 | 0.228 | Contact Map | 0.707 |
| 2oafA | 2 | 0.9925 | 99.9 | 0.232 | Contact Map | 0.84 |
Sequence Conservation (Image Generated using WebLogo v3)