| UniProt: | P0ABV2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10272 | ||
| Length: | 141 (135) | ||
| Sequences: | 2588 | ||
| Seq/Len: | 19.17 |
| EXBD
Paralog alert: 0.80 [within 20: 0.08] - ratio of genomes with paralogs Cluster includes: EXBD TOLR |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 69_K | 73_S | 3.584 | 1.00 | |
| 108_K | 113_E | 2.812 | 1.00 | |
| 73_S | 80_P | 2.779 | 1.00 | |
| 87_I | 124_Q | 2.51 | 1.00 | |
| 112_Y | 132_L | 2.507 | 1.00 | |
| 113_E | 117_K | 2.379 | 1.00 | |
| 70_A | 109_T | 2.343 | 1.00 | |
| 21_T | 24_I | 2.313 | 1.00 | |
| 82_T | 85_T | 2.141 | 1.00 | |
| 114_T | 117_K | 2.132 | 1.00 | |
| 112_Y | 115_L | 2.017 | 1.00 | |
| 79_D | 89_A | 1.941 | 1.00 | |
| 69_K | 75_F | 1.857 | 1.00 | |
| 68_V | 118_V | 1.841 | 1.00 | |
| 90_L | 122_L | 1.805 | 1.00 | |
| 19_N | 29_V | 1.772 | 1.00 | |
| 74_M | 118_V | 1.696 | 1.00 | |
| 89_A | 92_A | 1.67 | 1.00 | |
| 116_M | 120_D | 1.656 | 1.00 | |
| 31_L | 34_F | 1.649 | 1.00 | |
| 94_T | 127_Y | 1.634 | 1.00 | |
| 20_V | 24_I | 1.584 | 1.00 | |
| 87_I | 91_N | 1.543 | 1.00 | |
| 111_D | 114_T | 1.541 | 1.00 | |
| 83_D | 114_T | 1.497 | 1.00 | |
| 66_L | 76_I | 1.484 | 1.00 | |
| 29_V | 33_I | 1.44 | 1.00 | |
| 97_K | 100_T | 1.403 | 0.99 | |
| 18_I | 29_V | 1.36 | 0.99 | |
| 83_D | 117_K | 1.315 | 0.99 | |
| 90_L | 127_Y | 1.314 | 0.99 | |
| 27_M | 30_L | 1.306 | 0.99 | |
| 49_L | 112_Y | 1.294 | 0.99 | |
| 47_V | 67_S | 1.254 | 0.99 | |
| 6_N | 9_L | 1.246 | 0.98 | |
| 85_T | 89_A | 1.233 | 0.98 | |
| 106_A | 112_Y | 1.213 | 0.98 | |
| 21_T | 29_V | 1.196 | 0.98 | |
| 75_F | 80_P | 1.195 | 0.98 | |
| 102_I | 127_Y | 1.191 | 0.98 | |
| 83_D | 121_T | 1.171 | 0.98 | |
| 110_V | 114_T | 1.167 | 0.97 | |
| 120_D | 123_H | 1.164 | 0.97 | |
| 72_N | 114_T | 1.152 | 0.97 | |
| 28_L | 33_I | 1.15 | 0.97 | |
| 5_L | 8_N | 1.15 | 0.97 | |
| 106_A | 115_L | 1.144 | 0.97 | |
| 32_I | 35_M | 1.131 | 0.97 | |
| 89_A | 93_L | 1.125 | 0.97 | |
| 29_V | 39_P | 1.121 | 0.97 | |
| 24_I | 28_L | 1.112 | 0.96 | |
| 21_T | 25_D | 1.103 | 0.96 | |
| 18_I | 25_D | 1.095 | 0.96 | |
| 4_H | 7_E | 1.082 | 0.96 | |
| 88_T | 91_N | 1.08 | 0.95 | |
| 93_L | 96_G | 1.058 | 0.95 | |
| 29_V | 36_V | 1.042 | 0.94 | |
| 66_L | 122_L | 1.041 | 0.94 | |
| 20_V | 33_I | 1.041 | 0.94 | |
| 21_T | 39_P | 1.037 | 0.94 | |
| 64_V | 76_I | 1.035 | 0.94 | |
| 47_V | 107_D | 1.028 | 0.94 | |
| 19_N | 33_I | 1.021 | 0.93 | |
| 25_D | 38_A | 1.016 | 0.93 | |
| 26_V | 35_M | 1.016 | 0.93 | |
| 32_I | 36_V | 1.009 | 0.93 | |
| 67_S | 75_F | 1.005 | 0.93 | |
| 72_N | 110_V | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2pfuA | 1 | 0.7021 | 99.7 | 0.474 | Contact Map | 0.459 |
| 2jwkA | 2 | 0.4894 | 99.2 | 0.619 | Contact Map | 0.541 |
| 2w3zA | 1 | 0.9716 | 46.6 | 0.895 | Contact Map | 0.254 |
| 3ghfA | 1 | 0.6028 | 27 | 0.908 | Contact Map | 0.501 |
| 1hf2A | 4 | 0.5603 | 23.4 | 0.91 | Contact Map | 0.428 |
| 2jvfA | 1 | 0.5887 | 11.8 | 0.921 | Contact Map | 0.433 |
| 1uuqA | 1 | 0.6383 | 10.7 | 0.923 | Contact Map | 0.465 |
| 2obbA | 1 | 0.539 | 9.6 | 0.925 | Contact Map | 0.385 |
| 3d3aA | 1 | 0.5674 | 9.1 | 0.925 | Contact Map | 0.607 |
| 4narA | 1 | 0.4965 | 7.6 | 0.928 | Contact Map | 0.391 |
Sequence Conservation (Image Generated using WebLogo v3)