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Coupling matrix for [Y:0055] and [V:0056]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 -0.2 -0.4 -0.5 -0.1 -0.1 0 0.6 0.4 -0.1 -0.1 -0.1 0 0 0.6 0 0.3 -0.1 -0.2
F 0.1 0 0.5 0.4 1.1 -0.3 0.1 0.1 -0.3 -0.4 -0.4 -0.1 0.2 0.1 0.2 -0.2 0.7 -0.3 -0.6 -0.5
I -0.2 0.1 -0.3 1.2 -0.5 -0.1 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0.3 0.1 0.3 -0.1 -0.1
L 0.2 -0.5 0.3 0.6 -0.1 0.4 -0.2 -0.2 -0.1 0 -0.2 0.5 0 -0.1 -0.1 0.1 -0.1 0 0.1 0.3
V -0.1 0.4 -0.3 0.2 0.3 -0.1 0.1 0.3 -0.1 -0.2 -0.1 0 -0.1 0 0 0.1 -0.3 0.1 -0.2 0.7
M -0.1 -0.1 0.1 -0.2 -0.4 -0.1 0.5 0 0 -0.1 -0.1 -0.1 0.3 0 0 0.2 -0.1 0.5 -0.1 -0.2
W 0.8 -0.1 0.1 -0.6 0.2 0.3 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 0 0 -0.2 0 -0.1 -0.1 0.1
Y -0.3 0.8 1 0.4 1.1 0.2 -0.3 -0.3 -0.2 -0.3 -0.2 -0.6 -0.4 -0.2 -0.2 -0.7 0.5 -0.6 -0.7 0.5
D 0.2 -0.1 0 -0.5 -0.3 -0.1 0 0.3 0 0.3 0 0.5 0 0 0 -0.1 -0.1 0 0.3 -0.1
E -0.1 -0.1 0.2 -0.2 -0.4 0 0 0 0.3 0.3 0 -0.1 0 0 0 0.2 -0.1 0 0 -0.1
K -0.1 -0.1 0.2 -0.2 -0.1 0.3 0 0 0 0 0.4 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1
R 0 -0.3 -0.4 0.3 0.1 0 0 -0.1 -0.1 0.2 0 -0.1 -0.1 0 0 0 -0.1 -0.1 1 0
H 0 0.2 0 0.2 0.7 0.2 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 -0.1 -0.4 0.9 -0.2 -0.1 -0.4
N -0.1 -0.1 -0.2 -0.1 0 -0.1 0 0 0 0.5 0 0 0.3 0 0 -0.1 -0.2 0 -0.1 0.2
Q -0.1 0.2 -0.3 -0.5 0 -0.1 0 -0.1 0 -0.1 -0.1 0.5 0.3 0 0 0.2 -0.2 -0.1 -0.1 -0.1
S -0.2 0 0 -0.1 -0.1 -0.2 0.3 0.5 0.2 -0.2 0.1 -0.2 -0.1 0 0 0.4 -0.4 0.2 0.4 0
T -0.2 -0.2 -0.2 -0.1 -0.6 -0.1 -0.1 -0.1 -0.1 0.4 0.3 0.2 0.1 0 0 0 0.1 -0.1 0.4 0.2
G -0.1 0 -0.1 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.4 0
P -0.1 -0.1 -0.1 -0.2 -0.4 0 0 0 0 -0.1 0.4 0 0 0.1 0 0.5 -0.2 0.4 0 -0.1
C 0.7 0.4 -0.3 0.3 0.7 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 0 0 -0.1 -0.3 -0.1 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0055 0.1 -0.2 0.2 1 0.2 -0.1 -0.2 -1.4 0.1 -0.2 -0.2 0.2 -0.1 -0.3 0.1 0.8 0.2 -0.6 -0.4 0.9
0056 0.4 0.4 -0.1 0.7 0.1 -0.1 -0.2 -0.1 -0.3 0.3 -0.1 0 -0.3 -0.8 -0.8 0.9 -0.2 0 0.1 -0.1
Select residue pair below:
i_j Score Prob
0052_0055 1.079 0.95
0009_0055 0.688 0.59
0037_0055 0.613 0.46
0049_0055 0.394 0.16
0011_0055 0.387 0.15
Local Interactions:
i_j Score Prob
0054_0055 1.510 1.00
0055_0056 0.681 0.57
0053_0055 0.580 0.40
0055_0057 0.387 0.15
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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