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Coupling matrix for [Y:0009] and [Y:0055]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.1 -0.1 0.4 0.1 -0.1 0.2 -1 -0.1 0 -0.1 -0.1 0.3 -0.1 -0.1 0.2 -0.1 0.3 0 0.3
F 0 1 0 0.1 0 0 -0.5 0.8 -0.2 0.2 -0.2 0.5 -0.5 -0.4 0 0.1 0.5 -0.1 -0.2 -0.8
I 0 -0.3 0 -0.1 0 0 0 0 0 0 0 -0.1 0.1 0 0 0 0 0 0 0.2
L -0.1 0.4 0.2 0 -0.1 -0.1 -0.1 -0.1 0.3 0 0 0.2 -0.4 0.6 -0.1 -0.2 -0.1 0 0 -0.3
V 0 0.5 0 -0.2 0.3 0 -0.1 -0.5 0 0 0 -0.1 -0.3 -0.1 0 -0.1 0 0 0 0.7
M 0 0.2 0 -0.1 -0.1 0 0.4 0 0 0 0 0 -0.1 0 0 -0.1 0 0 0 -0.1
W -0.2 -0.3 0.1 0.5 -0.3 -0.2 -0.2 0.4 -0.1 -0.1 -0.1 0.7 0.6 0.1 0 0.3 0.1 -0.1 -0.1 -0.7
Y 0.4 0.4 0.1 -0.3 0.3 0.1 0.8 1.1 0.4 0 -0.2 0.2 -0.7 -0.8 0 0 0 -0.1 -0.2 -1.2
D 0 -0.2 0 1.2 -0.1 0 0 -0.1 0 0 0 -0.1 -0.2 0 0 -0.1 0 0 0 -0.2
E 0 -0.6 0.5 -0.2 -0.2 -0.1 -0.1 -0.6 -0.1 -0.1 0.7 -0.1 0.1 -0.1 -0.1 0.1 -0.1 0 0 1.2
K -0.1 -0.5 0.1 -0.2 0 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 0.9 0.5 -0.1 -0.4 -0.1 0 -0.1 0.6
R 0.3 -0.8 -0.2 -0.1 0.1 -0.1 -0.1 -0.3 0.2 0.3 -0.1 -0.2 1 0.3 0.3 -0.1 -0.1 -0.1 -0.1 0.1
H -0.3 0.5 -0.2 -0.3 -0.1 0.8 0.1 0.6 -0.1 -0.1 -0.1 -0.3 -0.1 -0.2 0.2 -0.5 0.1 -0.1 0.6 -0.1
N 0 0.4 -0.1 -0.2 -0.1 0 0 -0.6 0 0 0.4 0.3 0.1 0 0 -0.1 0 0 0 -0.2
Q -0.1 0.2 -0.1 0 0.3 -0.1 -0.1 -0.4 0 0 0 -0.1 0 -0.1 -0.1 0.2 -0.1 0 0 0.3
S -0.1 -0.1 0.3 0.4 -0.1 0 -0.1 -0.1 0 0 0 -0.2 -0.1 -0.1 -0.1 0.2 -0.1 0 0 0.3
T 0 0.2 -0.1 -0.2 0.2 0 0 0 0 0 0 -0.1 -0.2 0.3 0 0.3 0 0 0 -0.2
G 0 -0.6 0 0.1 -0.1 0 0 0.3 0 0 0 -0.1 0.1 0 0 -0.1 0 0 0 0.2
P 0 -0.2 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
C 0.3 -0.2 -0.1 -0.2 -0.2 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 0.2 -0.5 -0.1 0.3 0.5 -0.1 0 0 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0009 0.4 0.8 -0.7 0.2 -0.2 -0.4 0.3 1.4 -0.3 0.1 0.3 0.6 0.3 -0.4 -0.2 0.1 0 -0.6 -1.1 0
0055 0.1 -0.2 0.2 1 0.2 -0.1 -0.2 -1.4 0.1 -0.2 -0.2 0.2 -0.1 -0.3 0.1 0.8 0.2 -0.6 -0.4 0.9
Select residue pair below:
i_j Score Prob
0052_0055 1.079 0.95
0009_0055 0.688 0.59
0037_0055 0.613 0.46
0049_0055 0.394 0.16
0011_0055 0.387 0.15
Local Interactions:
i_j Score Prob
0054_0055 1.510 1.00
0055_0056 0.681 0.57
0053_0055 0.580 0.40
0055_0057 0.387 0.15
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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