May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
SH3 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0053] and [Y:0055]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 0.3 -0.4 -0.2 -0.6 0.5 0 0.6 -0.3 0.2 -0.2 0.6 0.3 -0.5 -0.1 0.4 0 -0.1 0.2 0.5
F -0.1 0.1 0.3 0 -0.1 -0.1 -0.1 0 0 0 0 0.1 -0.4 -0.1 0.3 0.2 -0.1 0 0 -0.2
I 0.1 -0.1 0.2 -0.1 -0.2 -0.1 -0.2 0.2 0.2 -0.1 -0.1 0.4 0.3 0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1
L -0.1 -0.8 -0.2 0.3 0.1 -0.1 -0.2 -0.2 0 -0.1 -0.1 0.3 0.9 0.3 0 0.1 0.1 -0.1 0.3 -0.4
V 0.6 0.1 -0.2 -0.1 0 -0.1 0.1 0.4 -0.1 -0.1 0 0.4 -0.1 0 0.1 0.2 0.1 -0.1 -0.1 -0.4
M -0.1 0 -0.1 -0.2 -0.1 0 -0.1 0.2 0 0 0 0.2 -0.3 0 0 -0.1 0.3 0 0 0.2
W 0 0.5 0 -0.1 -0.1 0 0 -0.5 0 0 0 -0.1 -0.1 0 0 0 0 0 0 -0.1
Y -0.1 0.1 -0.1 0.3 -0.1 0 -0.1 0.1 0 0.4 0 -0.2 -0.4 0 0 -0.1 -0.1 0 0 -0.1
D -0.1 1.4 -0.1 -0.3 -0.2 -0.1 -0.1 -1.1 0.3 0 -0.1 -0.4 0.1 -0.1 -0.1 0.2 -0.1 0 0 0.1
E -0.2 0.4 0 0 -0.4 -0.1 -0.2 0.3 0.3 0.3 -0.1 -0.2 -0.2 -0.1 -0.2 0.3 0.6 0 0.3 -0.5
K -0.2 0.7 0.4 0.2 -0.1 -0.2 0.4 0.2 -0.2 0.2 -0.1 -0.5 -0.1 0.1 0 0 -0.3 -0.1 -0.1 0.2
R -0.1 -0.2 -0.3 1.1 0.3 0.1 0.8 -0.6 0.1 0 0.2 0.2 -0.6 0.1 0.4 -0.4 0 0 -0.1 -0.6
H 0.1 0.4 -0.1 0.1 -0.1 -0.1 0.2 0.4 0.3 0 0 -0.2 -0.3 -0.1 -0.1 -0.2 -0.1 0 0 -0.2
N -0.1 -0.2 0.3 -0.1 0.2 -0.1 0.2 -0.1 -0.1 0 0 -0.3 0 0 0.3 -0.1 -0.1 0 0 0.1
Q 0.2 -0.2 -0.1 -0.3 -0.2 -0.1 -0.1 0.2 -0.1 0 0.3 -0.2 0.3 -0.1 -0.1 0.4 -0.1 0 -0.1 0.2
S -0.3 0.2 -0.2 -0.1 0.7 0.2 -0.1 0.4 -0.1 -0.3 0.3 -0.5 0.1 0.2 -0.2 -0.4 -0.1 0.4 -0.2 0.3
T -0.1 -0.2 0.1 0.3 0 -0.2 -0.5 0 0.2 -0.2 -0.1 0.1 0.4 0.1 -0.1 -0.3 -0.2 -0.1 -0.1 0.9
G 0.8 -1.5 0.2 -0.4 0.6 0.1 -0.1 0.1 -0.2 -0.1 0.1 0.4 -0.2 -0.2 0.2 0 -0.1 -0.1 0.1 0.5
P 0.1 0 -0.1 -0.1 -0.2 0.5 -0.1 -0.4 -0.1 -0.1 -0.1 0 0.3 0.3 -0.1 0.2 0.2 0 -0.1 -0.1
C 0.2 -0.4 0.2 0.6 0.2 -0.1 -0.1 -0.1 -0.1 0 0 -0.2 -0.1 -0.1 -0.1 0.1 -0.1 0 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0053 1.2 -0.5 0.5 0.3 0.7 -0.6 -1.3 -1 -1.6 0.1 0.9 0.8 -0.3 -0.3 -0.2 1.1 0.7 0.3 0.1 -0.1
0055 0.1 -0.2 0.2 1 0.2 -0.1 -0.2 -1.4 0.1 -0.2 -0.2 0.2 -0.1 -0.3 0.1 0.8 0.2 -0.6 -0.4 0.9
Select residue pair below:
i_j Score Prob
0052_0055 1.079 0.95
0009_0055 0.688 0.59
0037_0055 0.613 0.46
0049_0055 0.394 0.16
0011_0055 0.387 0.15
Local Interactions:
i_j Score Prob
0054_0055 1.510 1.00
0055_0056 0.681 0.57
0053_0055 0.580 0.40
0055_0057 0.387 0.15
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
Page generated in 0.0206 seconds.