May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0313] and [T:0314]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.8 0.5 0.3 0.1 0.3 0 1.2 0.7 -0.2 -0.1 0 -0.5 -0.1 -0.5 0 0.1 0 -0.1 -0.1 -0.5
F 0.9 0.2 -0.5 0 0.1 0.4 -1 -0.1 -0.3 -0.2 -0.2 -0.3 -0.3 0.7 -0.2 0.4 0.5 0.5 -0.2 0.4
I 0.3 0.1 0 0 0.1 0 -0.3 0.5 -0.1 -0.1 0 -0.1 -0.5 -0.3 -0.1 0.8 0.8 0.7 -0.2 0
L 0.8 0.2 0.3 0.5 0.4 0.1 0.2 0.2 -0.3 -0.1 -0.4 -0.8 0.1 0.1 -0.2 0.5 0.6 0.6 -0.5 0
V 0.1 0.2 -0.3 -0.2 -0.2 -0.4 0.1 0.7 -0.4 -0.1 -0.2 -0.5 0.7 -0.1 -0.3 0.9 0.6 0.4 -0.1 -0.2
M 0 0.2 0.3 0.3 0.2 0.3 -0.4 -0.3 -0.1 -0.1 0.1 -0.1 0.1 -0.1 -0.1 0.4 -0.1 -0.3 -0.1 0.7
W 0.6 -0.5 -0.3 -0.2 -0.2 -0.1 -0.2 -0.3 0.2 0 0 0.1 0 0 0 -0.1 -0.2 0.3 0 0.9
Y 1 -1.1 0.2 -0.3 -0.4 -0.3 -0.7 -0.7 0.6 -0.1 -0.1 0.8 0.2 0.2 0.3 0.7 0.2 -0.2 0 -0.5
D 0.1 -0.1 -0.2 0.1 -0.3 0 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.1 -0.1
E -0.3 -0.1 -0.1 -0.1 -0.3 0 0 -0.1 0 0 0 0.5 0 0 0 -0.2 0.1 0 0 -0.1
K -0.1 0.1 -0.1 0.1 -0.4 0 0.2 -0.1 0 0 0 0.1 0 0 0 -0.3 0 -0.1 0 0.3
R -0.1 -0.3 -0.2 -0.1 0 -0.1 -0.1 -0.2 0 0 -0.1 0.4 0.1 0 0 0.7 -0.1 -0.1 0.4 -0.4
H 0.9 -0.1 -0.2 0.1 -0.5 -0.1 -0.1 0 0.4 0 0.2 -0.1 0 0.3 0 -0.5 -0.4 -0.1 0.1 -0.2
N -0.6 -0.2 0 0.3 -0.1 -0.1 -0.1 -0.1 0.1 0 0.2 0 0 0 0.2 0 -0.1 -0.1 0 -0.1
Q -1.2 -0.2 0 0 0.4 -0.1 -0.1 0.2 0.1 0 -0.1 0 0 0 0 0.5 0.6 -0.3 0 -0.4
S -1 0.3 0.7 0.2 0.6 -0.2 0.4 -0.4 0.1 0.2 -0.1 -0.1 0 0 0.2 -1.2 -0.1 -0.2 0.3 0.3
T 0 -0.2 0.4 -0.1 0 0 -0.2 0.1 -0.1 0.4 0.4 0.1 -0.1 -0.1 -0.1 -0.4 0 0.1 0 -0.2
G -0.5 0.1 0.5 0 0.5 -0.3 0.4 0 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.6 -0.8 -0.2 -0.1 -0.2
P -0.1 -0.1 -0.3 -0.2 -0.1 0 0 -0.1 0 0 0 0.1 0 0 0 -0.2 0 0.1 0 0
C 0.1 0.6 0 -0.1 0.2 0.4 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.5 0.1 -0.4 -0.1 0.5

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0313 0.8 1.6 2.2 2.8 2.1 0.6 -0.9 0.4 -1.4 -1.7 -1.2 -1.3 -0.8 -1 -1.7 -0.1 0.1 -0.6 -1.3 0.1
0314 1.1 0.8 1.4 1.5 1.7 0.2 -0.3 0.6 -1 -0.9 -0.8 -0.6 -0.7 -0.8 -0.9 -0.8 0 0.1 -1.1 0.8
Select residue pair below:
i_j Score Prob
0313_0324 1.122 0.97
0036_0313 0.640 0.50
0304_0313 0.578 0.40
Local Interactions:
i_j Score Prob
0313_0314 1.235 0.98
0312_0313 0.878 0.84
0311_0313 0.780 0.73
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0217 seconds.