OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [R:0301] and [A:0303]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	0.6	-0.1	0.3	-0.4	0.3	-0.1	-0.1	0.1	-0.1	-0.1	-0.1	0.4	0	-0.2	0.2	0.2	-0.4	-0.1	-0.2
F	0.3	-0.7	-0.3	-0.4	0.1	-0.3	-0.2	-0.3	0	-0.1	-0.1	-0.1	0.1	-0.1	-0.2	0.6	0.5	0.6	-0.3	0.9
I	-0.1	-0.3	-0.5	-0.7	-0.7	-0.2	0.2	0	0	-0.1	-0.2	-0.1	0.6	0.2	-0.3	0.3	0.6	0.8	0.4	0.4
L	0.3	0.5	-0.2	0.1	0.1	0.1	-0.1	-0.1	-0.3	-0.2	-0.2	-0.3	-0.3	-0.4	-0.1	0.7	0.3	0.7	-0.3	0.8
V	-0.3	-0.1	-0.5	-0.4	-0.4	-0.4	0.2	0.1	0.3	0	-0.1	-0.2	-0.1	0.4	0.1	0.7	0.2	0.2	-0.1	0.5
M	-0.4	-0.5	-0.1	-0.2	0.1	0	-0.1	-0.1	-0.1	0.2	0.2	-0.1	-0.2	0.1	-0.1	0.2	0	0.9	-0.1	0.3
W	0.2	-1	0.2	0.7	0.5	0.4	-0.2	0	-0.2	-0.1	-0.1	0.1	-0.2	-0.1	0	-0.3	-0.2	-0.1	-0.3	1
Y	0.5	-0.1	0.3	0.1	0.4	-0.3	-0.2	0	-0.2	-0.1	-0.1	-0.1	0.5	-0.3	0.3	0.2	0	-0.3	0.3	-0.2
D	-0.1	-0.2	0.2	0	-0.1	-0.3	-0.1	-0.1	-0.1	0	0	0.1	0.2	0.2	-0.1	-0.2	0.2	-0.1	0	0.1
E	0.3	0.5	0.3	0.1	0.2	0.5	0.2	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.3	-0.4	-0.2	-0.2	-0.6
K	-0.1	1.2	0.4	0.6	0.1	0	0.1	0.3	-0.1	0.2	-0.1	-0.1	-0.1	-0.1	0.1	-0.4	-0.5	-0.5	0	-1
R	0.2	0.1	0.1	0.1	0.3	0.2	-0.1	-0.3	0	0.1	0.1	0.2	-0.4	-0.1	0.3	-0.3	0.1	-0.8	-0.3	0.5
H	0.3	0.1	0.1	0.2	0.3	0.1	-0.1	-0.1	-0.1	0	0	0.2	-0.1	-0.1	0.1	-0.5	-0.4	0.5	-0.2	-0.2
N	-0.3	0.6	0.8	0.4	0.5	0.3	0.1	-0.1	-0.2	-0.1	0.1	0.4	-0.2	-0.3	-0.2	-0.9	-0.4	-0.6	-0.1	0.6
Q	-0.1	-0.3	0.6	0.2	0.1	0.4	-0.1	-0.1	-0.1	0.2	0.4	0.2	-0.1	-0.1	0.3	-0.6	0.8	-0.6	-0.2	-0.6
S	0	-0.1	0.5	0.5	0.2	0.5	0.2	-0.1	0.1	0.1	-0.1	-0.2	-0.1	0.1	-0.1	-0.4	-0.4	0	0.5	-0.6
T	0.2	0.2	0.5	0.6	0.3	0.5	-0.3	-0.3	-0.3	-0.3	-0.2	-0.1	-0.4	-0.2	-0.1	-0.1	0	-0.1	0.2	0.3
G	-0.4	-0.4	-0.1	-0.1	0.2	0.1	0.1	0.3	-0.1	-0.1	0.2	0	0	0.1	-0.1	0.8	-0.4	0.1	0.8	-0.7
P	0.6	-0.1	-0.2	-0.7	-0.4	-0.6	-0.1	0.2	0.7	0	0	-0.1	-0.1	0.9	-0.1	0.6	-0.1	-0.2	0.2	-0.6
C	-0.2	0	-0.2	0.2	-0.2	0.4	0.1	0.2	-0.1	0	0	-0.1	0.1	-0.1	-0.1	0.3	0.3	-0.4	-0.1	-0.6

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0301	0.1	0	0	0.7	0.4	-0.3	-0.4	0.1	-0.7	-0.4	-0.3	0.8	-0.3	0.5	-0.1	1	1.4	0	-0.7	-0.7
0303	0.9	1.1	1.6	1.3	1.4	0.8	-0.7	-0.6	-0.8	-0.8	-0.9	-0.7	-0.7	-0.4	-0.6	0.1	0.6	0.1	-0.5	0

Select residue pair below:

i_j	Score	Prob
0272_0303	1.335	0.99
0262_0303	1.230	0.98
0274_0303	1.110	0.96
0280_0303	0.845	0.81
0260_0303	0.836	0.80
0303_0315	0.544	0.35
0303_0314	0.530	0.32

Local Interactions:

i_j	Score	Prob
0303_0304	0.799	0.75
0303_0305	0.685	0.58
0301_0303	0.581	0.40
0302_0303	0.566	0.38

See all coupling residues
Download raw data

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