OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0262] and [A:0303]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	-0.4	0.4	0.6	0.6	0.3	-0.2	-0.2	0.1	0	-0.3	0.3	-0.2	-0.1	0.1	-0.5	-0.3	-0.1	0.3	0
F	0.6	0	-0.2	-0.6	0.3	-0.1	0	0.2	0	0	0	0	-0.1	0.2	0	-0.3	0.7	0	-0.1	-0.4
I	0	-0.2	0.2	0.6	-0.1	0.9	-0.1	0.3	-0.1	0.2	0.2	-0.1	-0.1	0.1	-0.1	0	-0.6	-0.4	-0.2	-0.5
L	0.1	-0.1	0.3	0.6	-0.2	1.3	-0.1	-0.2	-0.1	-0.1	0.1	0.1	0.3	0	0.1	-0.4	-0.3	-0.2	-0.3	-0.5
V	0	-0.5	0.1	0.4	0	0.7	0.3	-0.3	0	-0.2	0.1	-0.1	-0.3	0	-0.3	-0.1	-0.5	0.2	1	-0.2
M	-0.2	-0.1	-0.1	0.2	-0.5	0.1	0	0.2	0	0	0	0.1	-0.1	-0.1	-0.1	-0.1	0.2	0	-0.1	-0.1
W	-0.4	0.2	-0.4	-0.5	0.1	0.3	0	0	0	0	0	0	0	0	0	0.1	-0.1	0.2	0	-0.1
Y	-0.5	-0.3	0.9	-0.3	0.1	0.1	0.2	0	-0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.4	-0.5	0	-0.1	0.6
D	0.1	0.3	0	0.1	0.5	-1.1	-0.1	-0.2	-0.2	0	-0.1	-0.2	-0.3	0.2	-0.2	-0.1	0.4	0.3	0.1	0.1
E	0.2	0.8	0	0.2	-0.2	-0.2	0.1	-0.2	0.1	-0.1	-0.1	-0.2	0.3	-0.1	-0.2	0.2	-0.2	0	-0.4	-0.1
K	-0.3	0.7	0.5	0.2	-0.1	-0.5	0.1	0	0	0.1	0.3	-0.1	0	-0.3	0.4	-0.4	-0.2	-0.7	-0.4	0.5
R	0.1	0.5	-0.1	0.1	-0.2	-0.2	0.1	0.7	0.2	-0.2	-0.1	-0.2	0	-0.3	0.1	-0.2	0.3	0.1	-0.5	0
H	0.4	0.1	-0.2	-0.9	-0.2	-0.5	-0.1	-0.1	-0.1	0.2	-0.1	-0.1	-0.1	0.3	-0.1	1.3	0.4	0.5	-0.1	-0.4
N	0.1	0.2	-0.1	-0.6	-0.1	-0.5	-0.1	-0.1	0.2	0	0	-0.1	-0.1	0.2	-0.1	0.7	0.3	0	-0.1	0.2
Q	0.2	0.5	0.1	0.3	-0.3	0.1	-0.1	-0.2	-0.2	0.1	-0.1	-0.2	0	0.1	-0.2	-0.1	0.4	-0.2	0.2	-0.1
S	0.5	-0.3	0	-0.1	0.3	-0.5	-0.4	0.1	-0.1	-0.1	-0.2	-0.1	-0.3	-0.5	0.2	0.7	0.8	0.3	0	0.1
T	0.1	-0.3	0.1	0.3	0.2	0.1	0	0	-0.2	-0.1	-0.1	-0.2	0	0.7	0	-0.1	0.1	-0.5	0.5	0
G	0	0.4	-0.4	-0.3	-0.2	-0.5	0.2	-0.1	0.1	-0.1	-0.1	0	0.6	-0.2	0.3	0	-0.4	0.5	0.1	0.2
P	0	0.4	-0.3	-0.3	0.1	-0.2	0	0	0	0	0	0.2	0	0	0	0.1	-0.1	-0.1	0	-0.3
C	-0.4	-0.9	0.4	0.2	0.6	0.5	-0.2	-0.2	-0.1	-0.1	0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	0.2	-0.2	1.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0262	0.7	-0.3	0	0.2	0.8	-0.7	-1.3	-0.5	0.3	0.2	0.1	0.2	0	-0.1	0.1	0.8	0.9	0	-1.1	0.6
0303	0.9	1.1	1.6	1.3	1.4	0.8	-0.7	-0.6	-0.8	-0.8	-0.9	-0.7	-0.7	-0.4	-0.6	0.1	0.6	0.1	-0.5	0

Select residue pair below:

i_j	Score	Prob
0272_0303	1.335	0.99
0262_0303	1.230	0.98
0274_0303	1.110	0.96
0280_0303	0.845	0.81
0260_0303	0.836	0.80
0303_0315	0.544	0.35
0303_0314	0.530	0.32

Local Interactions:

i_j	Score	Prob
0303_0304	0.799	0.75
0303_0305	0.685	0.58
0301_0303	0.581	0.40
0302_0303	0.566	0.38

See all coupling residues
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