May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0274] and [A:0303]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.4 0.5 0.6 0.6 0.5 0.1 -0.2 -0.2 0.1 0.1 0.2 -0.1 -0.3 -0.2 -0.6 0.1 -0.3 0.2 0.2
F 0.2 -0.4 -0.1 -0.5 -0.1 0.2 0 0 0 0 0 0.2 0 0 0 -0.2 0.2 0.7 -0.1 -0.1
I 0.2 0.1 0.5 0.4 0.3 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.6 -0.1 -0.2 0.1
L 0.2 0.1 -0.4 -0.2 -0.8 -0.3 0.4 0.2 0.1 0.1 -0.1 -0.1 0 0.2 -0.1 0.3 0.4 0.6 -0.3 0.3
V 0.1 -0.4 0.2 0.4 0.7 -0.1 -0.2 0.1 -0.3 -0.1 0.1 -0.2 -0.2 -0.2 0.3 -0.1 0.3 -0.9 0.1 0.9
M 0.6 0.3 -0.7 0.1 -0.4 -0.5 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0.8 -0.1 0
W 0.8 -0.3 0 -0.7 -0.1 -0.2 0 0 0 0 0 0 0 0 0 -0.1 0.1 0.3 0 -0.3
Y 0.5 -0.2 -0.2 -0.2 -0.4 0.1 0 0 0.2 0 0 0 0 0 0 0 -0.2 0.5 -0.1 0.4
D -0.3 -0.1 -0.2 -0.3 0.1 0.9 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0.2 -0.4
E -0.2 -0.1 -0.1 0.1 0 0.4 0 0 0 0.2 0 0 0 0 0 -0.1 0.1 -0.1 0 -0.3
K -0.6 1.4 0.6 -0.6 -0.7 -0.4 0 0 0 0 0 0 0 0 0 -0.2 -0.2 -0.1 0 0.4
R 0.9 0.6 -0.7 -0.6 0.1 -0.6 -0.1 0 0 0.3 0 0 -0.1 0.2 0 0.4 0 0.3 0.1 -0.6
H -0.5 -0.2 0 0.5 -0.5 0.8 0 -0.1 0 0 0 0 -0.1 0 -0.1 0.2 -0.1 -0.2 -0.1 -0.1
N -0.6 -0.6 0.1 0.3 0.4 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.3 -0.2 -0.1 0.1
Q -0.1 1 -0.4 -0.2 0.2 -0.3 0 0 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 -0.2
S -0.5 0.4 0.4 0.3 0.2 0.5 0.1 0.1 -0.1 -0.2 -0.2 0 0.6 0 -0.1 0.2 0.4 -0.3 0.1 -0.6
T 0.6 -0.4 -0.2 0.1 -0.1 -0.3 -0.2 -0.3 0 0.1 -0.2 -0.2 -0.3 0 0.1 1.1 -0.7 0.6 0.5 0.4
G -0.3 -0.5 0.5 0.7 0.7 0.1 -0.4 -0.2 0.1 -0.6 0 0.1 0.3 0.2 -0.2 -0.1 0.6 -0.7 0 -0.3
P -0.1 0.6 0.3 -0.6 0.2 -0.8 -0.1 0.3 0 0 0 0 -0.1 0.2 0 0 0.3 -0.2 -0.1 0.1
C -0.4 0.3 0.6 0.4 0.5 0.2 0.1 -0.3 0 -0.2 0.1 -0.2 -0.1 -0.1 -0.1 0 -0.1 -0.2 -0.4 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0274 1.9 -0.5 0.6 0.5 1.2 -0.6 -1.1 -0.4 -0.6 -0.6 -1.3 -0.3 -1.5 -0.4 -0.8 1.2 0.9 0.8 -0.6 1.1
0303 0.9 1.1 1.6 1.3 1.4 0.8 -0.7 -0.6 -0.8 -0.8 -0.9 -0.7 -0.7 -0.4 -0.6 0.1 0.6 0.1 -0.5 0
Select residue pair below:
i_j Score Prob
0272_0303 1.335 0.99
0262_0303 1.230 0.98
0274_0303 1.110 0.96
0280_0303 0.845 0.81
0260_0303 0.836 0.80
0303_0315 0.544 0.35
0303_0314 0.530 0.32
Local Interactions:
i_j Score Prob
0303_0304 0.799 0.75
0303_0305 0.685 0.58
0301_0303 0.581 0.40
0302_0303 0.566 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0157 seconds.