May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0192] and [L:0218]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.5 0.3 -0.1 0.8 -0.4 -0.4 -0.3 -0.2 0 -0.1 -0.2 -0.4 0.1 -0.4 -0.1 0.3 0.5 0.7 -0.2
F 0.2 0.4 0 0.3 -0.3 0 0.5 0 0 -0.2 -0.1 -0.1 -0.2 -0.2 -0.1 0 -0.1 0.1 -0.5 0.1
I 0.3 1.1 0.9 1.1 0.6 1 -0.3 -0.1 -0.4 -0.5 -0.2 -0.4 -0.1 -0.8 -0.2 0.3 0 -0.8 0.2 -0.1
L -0.2 0.7 0.5 0.4 0.1 0.3 0.4 0.1 -0.3 -0.5 0.6 -0.2 0.6 -0.3 -0.3 0.3 -0.1 -0.4 0.1 0.2
V 0.1 0.4 0.5 0.8 0.7 0.8 -0.7 -0.5 0.4 0.6 -0.5 0.1 -0.3 0.6 0.1 -0.3 0.1 -0.5 0 -0.4
M 0.6 0.3 0.4 0.1 0 0.1 -0.1 0.1 -0.1 -0.1 -0.1 0.1 0.2 -0.3 0.2 -0.5 -0.2 0.3 -0.2 0
W 0.6 -0.5 -0.3 -0.7 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.5 0.7 0.1 1.1
Y -0.6 -0.2 -0.2 0 -0.5 -0.1 0 0 0 0 0 0 0.2 0 0.2 -0.2 0.7 0.4 -0.1 -0.2
D -0.3 0.2 -0.4 0 -0.3 0.1 0 0 0 0 0 0 0 0 0 -0.1 0.2 -0.1 -0.1 -0.2
E -0.3 -0.1 0.3 -0.3 -0.1 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.2
K -0.6 0.6 -0.4 -0.1 -0.4 -0.1 0 0 0 0.2 0 0 0 0 0 -0.1 0.1 -0.2 -0.1 0.7
R -0.6 0 -0.6 0 -0.5 0.1 0 0 0 0 0 0 0.2 0.2 0 0.1 0.1 -0.1 -0.1 0.7
H -0.2 -0.1 -0.4 0.5 -0.1 -0.1 0 0.2 0 0 0 0 0 0 0 -0.1 -0.1 0.1 -0.1 -0.4
N 0.5 -0.1 0 -0.3 -0.1 0.1 0 0 0 0 0 0 0 0 0 0.1 -0.2 -0.1 -0.1 -0.3
Q 0.8 -0.1 -0.6 -0.5 -0.9 0.3 0 0.2 0 0 0 0 0 0 0.2 0.3 -0.2 -0.1 -0.1 0
S 0.1 -0.1 0.2 -0.3 0.3 -0.3 0 0.4 0 0.4 0 0 -0.1 -0.1 -0.1 -0.2 0.1 -0.3 0 -0.3
T 0 -0.4 -0.2 0.2 0.7 -0.4 -0.1 0.1 -0.1 -0.1 0 0.1 -0.2 -0.1 -0.1 0.5 0.1 0 0.1 -0.1
G -0.3 -0.1 0.3 -0.1 0 0 -0.1 -0.1 0.2 -0.1 0 0 -0.1 0.2 -0.1 -0.2 0.1 0.3 -0.1 -0.2
P 0.2 -0.2 -0.4 -0.4 0 0 0 0 0.2 0 0 0.2 0 0 0 0.1 0 0.6 -0.1 -0.5
C -0.1 -0.5 0.6 -0.1 0.5 -0.4 0.5 -0.2 -0.1 -0.2 -0.1 0.2 -0.2 0.2 0.1 0.4 0 0.2 -0.2 0.6
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0192 1.1 0.8 2.4 2.5 2.9 0.8 -0.5 -0.9 -1.6 -1.7 -0.9 -1 -1.2 -1.2 -1.3 -0.4 0 -0.6 -0.8 1.1
0218 0.9 0.9 1.6 1.8 1.2 1.1 -1 -0.6 -0.8 -1.2 -1.1 -0.5 -1 -1.4 -0.6 0.6 0.2 0.5 -0.5 0.1
Select residue pair below:
i_j Score Prob
0184_0218 1.720 1.00
0186_0218 1.173 0.98
0174_0218 1.009 0.93
0218_0230 0.859 0.82
0172_0218 0.806 0.76
0192_0218 0.673 0.56
Local Interactions:
i_j Score Prob
0218_0220 0.756 0.69
0218_0219 0.722 0.64
0216_0218 0.579 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0121 seconds.