OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [T:0079] and [W:0106]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	-0.2	-0.2	-0.2	0.1	0.1	0	0.4	-0.1	-0.1	-0.1	0.2	-0.3	0.1	0.1	0	-0.4	0	-0.1	0.9
F	-0.2	0.3	0.6	0.1	0.9	0.7	-0.3	-0.6	-0.2	0.3	-0.2	-0.6	-0.5	-0.3	-0.4	0	0.1	-0.3	-0.1	0.1
I	1.1	0.3	0.2	0	-0.1	-0.1	0.5	0.3	-0.1	-0.1	-0.2	-0.3	-0.3	-0.2	0.1	-0.2	-0.5	-0.1	-0.1	-0.2
L	0.4	0.3	0.5	0.3	0.4	0.2	0.3	0.1	0	-0.2	-0.1	-0.7	-0.2	0.1	-0.3	-0.5	-0.6	0.4	-0.2	0
V	-0.2	-0.3	-0.1	0.1	-0.2	0	0.1	0.3	0.1	-0.1	-0.2	0.3	0.5	-0.1	0.4	0.6	-0.5	-0.2	-0.1	-0.1
M	-0.1	-0.1	-0.5	0.5	0.4	-0.3	0.2	-0.1	0	0	-0.1	-0.2	-0.1	-0.1	0.1	-0.2	0.1	-0.1	0.2	-0.1
W	0	-0.3	0.1	0	0.2	-0.1	-1.3	-0.8	0	0	0	0.1	0.8	0	0.2	-0.1	0.4	-0.1	0	0.2
Y	1.1	-0.2	-0.2	-0.5	-0.5	-0.2	-0.4	-0.1	-0.1	0.4	0.3	0.2	0	-0.2	0.4	0.2	0.1	-0.2	0	0
D	-0.6	-0.2	-0.1	-0.5	0	-0.4	0.1	0.7	-0.1	-0.1	0.7	0.5	0	0.2	-0.1	0.3	-0.2	-0.3	-0.1	0.3
E	-0.5	-0.1	0.2	0.6	-0.1	0.5	0.3	0.6	0.5	-0.1	-0.2	-0.4	-0.1	0	-0.2	0	-0.6	-0.3	-0.1	0.1
K	-0.1	-0.3	0.5	0	-0.3	0.6	0.1	0.1	-0.1	0.4	0	-0.4	-0.5	-0.3	0.6	-0.5	-0.1	0.6	-0.1	-0.3
R	-0.6	-0.2	-0.7	0.1	0	0.2	0.2	-0.1	-0.1	-0.1	0.1	0.8	0.4	-0.2	-0.3	0.1	0.2	0	-0.1	0
H	-0.1	0.1	-0.2	0.1	0.1	0.2	0.2	-0.4	0	-0.4	-1.3	-0.2	0.6	0.1	-0.7	1	1.7	0.2	-0.3	-0.6
N	-0.3	0.1	0	-0.2	-0.1	-0.5	0.4	0.4	-0.1	-0.1	0.3	-0.2	0.1	-0.2	0	0	-0.4	-0.2	0.4	-0.1
Q	-0.6	0.3	0.3	0.9	0.3	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	-0.7	0	0.2	0.3	-0.4	0.2	0	-0.1	-0.2
S	-0.1	-0.2	0.3	0	0.1	-0.2	0	0.3	0.2	0	-0.1	0.1	-0.1	1.1	-0.1	0	0.6	-0.3	-0.2	-0.3
T	-0.3	0.7	0.2	0.1	0	0.1	0.4	0.3	-0.2	-0.2	-0.2	0.2	-0.1	0.3	-0.3	-0.1	-0.1	0	-0.1	-0.3
G	0.6	-0.1	-0.5	-0.4	-0.3	-0.1	0.6	-0.1	-0.2	-0.1	1	0.8	0.2	0	-0.6	-0.5	0.3	0	-0.1	0.1
P	0.3	0.6	0.1	0.1	-0.1	-0.1	0.4	0	-0.1	-0.1	-0.2	0.5	-0.2	-0.2	-0.1	0	-0.2	0.2	-0.1	-0.3
C	-0.5	0.7	0	0.2	0	-0.2	0.3	0.3	-0.1	-0.1	-0.2	-0.1	0.2	-0.2	-0.1	-0.3	-0.5	0.1	-0.1	0.9

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0079	0.3	-0.3	-0.4	0.4	0.2	-0.8	-1.5	-0.2	0.3	0.3	0.1	0.1	-0.5	0	-0.1	0.9	0.6	0.5	0.3	-0.5
0106	0.2	1.6	0.7	1.4	1	-0.2	3	2.2	-1.6	-1.6	-1.2	-0.1	0.5	-1	-1.1	-0.5	-0.3	-1.2	-1.8	0.1

Select residue pair below:

i_j	Score	Prob
0079_0096	1.749	1.00
0079_0098	1.415	1.00
0079_0083	1.326	0.99
0079_0104	1.048	0.94
0079_0100	0.886	0.85
0076_0079	0.618	0.47
0079_0106	0.592	0.42

Local Interactions:

i_j	Score	Prob
0078_0079	1.600	1.00
0079_0080	1.138	0.97
0077_0079	1.006	0.93

See all coupling residues
Download raw data

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