May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [T:0079] and [E:0080]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.4 -0.5 0 0.3 -0.3 0.1 0 0 -0.2 -0.2 0.5 -0.1 -0.2 0.3 0.1 0.1 0.3 0 0.2
F 0.3 -0.6 0.1 -0.5 -0.1 -0.4 -0.2 0.1 0.5 0.5 0.1 -0.1 0 0 0 0.3 0.1 0.1 0.6 -0.6
I 0.3 -0.4 -0.3 0.6 -0.6 0.1 -0.2 -0.3 -0.2 0.1 0.4 0.2 -0.2 0.3 0.4 0.6 -0.5 0.1 0 -0.4
L 0.3 -0.1 0.1 -0.2 0.2 -0.3 -0.3 0 -0.4 -0.1 -0.1 0.1 0.1 0.4 -0.1 0.3 -0.2 0.3 0.9 -0.5
V 0.2 -0.1 -0.2 0.4 -0.7 1.1 0.1 -0.5 -0.5 -0.2 -0.4 -0.1 -0.7 0.3 0 0.2 -0.6 0.4 0.4 0
M -0.2 0 -0.1 -0.4 0.2 -0.2 0.1 -0.2 0.3 0.2 -0.6 -0.4 0.1 0.2 0.1 0.6 -0.3 0.6 -0.1 0.1
W -0.4 -0.1 -0.1 -0.2 -0.2 -0.1 0 -0.1 -0.6 0.2 -0.2 1.1 -0.2 -0.2 -0.2 -0.5 0.9 -0.7 -0.3 -0.1
Y 0 -0.3 -0.1 -0.2 0.2 -0.3 -0.1 -0.2 -0.4 -0.2 -0.2 0.1 -0.3 0.1 0.4 0.5 0.4 -0.4 0.1 0.7
D -0.2 0.1 0.3 -0.1 0.8 -0.3 0.1 0.2 0.1 -0.1 0.1 0 -0.3 0.1 0.4 -0.2 -0.1 -0.3 -0.9 0.8
E 0.3 0.3 0.4 -0.6 -0.7 0 -0.1 0.3 0.2 -0.5 0 -0.3 0.1 0.2 -0.2 -0.1 0.3 0.6 0 0.7
K 0.1 -0.3 0.2 0.5 0.1 0.5 -0.2 -0.6 0.6 -0.1 0.6 -0.6 0.2 -0.1 -0.1 -0.4 -0.1 0 1.1 -0.6
R -0.2 0.8 0 -0.3 -0.1 0.3 0.1 -0.2 0.5 -0.1 -0.5 0.7 -0.1 -0.5 -0.9 -0.1 0 0.3 0 0
H 0.1 0.3 0.1 0.1 0 0.1 -0.6 0.3 0 0.1 0.7 0.2 -0.5 -0.2 0.1 0.6 1.4 -0.3 -1 -0.2
N -0.4 -0.2 0.4 -0.1 0.3 0.1 0.4 -0.2 0.1 0.3 0.5 -0.2 0.4 -0.3 -0.3 -0.3 0.5 -0.1 -0.7 0.1
Q 0.6 0.2 0 -0.4 0.3 -0.5 0 -0.3 0.1 0 0.2 -0.3 0.6 -0.1 0.2 0.4 0 -0.1 0.2 -0.4
S -0.1 0.3 -0.3 0.3 -0.1 -0.4 -0.3 -0.1 0.1 0.1 0.6 -0.2 -0.4 0.3 0.2 0 0 0.1 0.2 0.2
T -0.1 0.4 0.1 0.7 0.1 0.4 0.1 0 -0.1 0.1 -0.4 -0.3 -0.4 0.2 0.6 -0.3 -0.4 -0.1 0 0
G 0.1 -0.3 -0.1 -0.4 0.3 -0.1 -0.1 0.3 -0.1 0 -0.2 -0.2 1.8 -0.1 -0.2 0 -0.2 -0.4 0.3 0
P 0.3 -0.3 -0.3 0.6 0.5 0.2 -0.2 -0.1 -0.1 -0.1 -0.1 0 0.2 0.1 -0.1 -0.2 0.1 -0.2 0 -0.1
C -0.3 -0.4 -0.1 0.2 -0.6 -0.4 -0.2 -0.1 0.5 0.8 -0.4 0 -0.3 0.2 0.8 -0.4 -0.8 0.6 -0.1 -0.6
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0079 0.3 -0.3 -0.4 0.4 0.2 -0.8 -1.5 -0.2 0.3 0.3 0.1 0.1 -0.5 0 -0.1 0.9 0.6 0.5 0.3 -0.5
0080 0.5 -0.9 -0.7 0.2 -0.4 -1.3 -2.4 -1.2 0.9 0.9 0.5 0.4 -0.4 0.5 0.4 1.3 0.6 1.2 0.8 -1.3
Select residue pair below:
i_j Score Prob
0079_0096 1.749 1.00
0079_0098 1.415 1.00
0079_0083 1.326 0.99
0079_0104 1.048 0.94
0079_0100 0.886 0.85
0076_0079 0.618 0.47
0079_0106 0.592 0.42
Local Interactions:
i_j Score Prob
0078_0079 1.600 1.00
0079_0080 1.138 0.97
0077_0079 1.006 0.93
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0247 seconds.