OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [R:0035] and [L:0086]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.4	-0.3	0.2	0.3	0.5	0.1	0.4	-1	0.2	0.3	0.3	0.7	0	-0.3	0	-0.2	-0.5	-0.5	0.4	0.1
F	-0.1	-0.5	0.1	-0.2	-0.2	-0.1	-0.1	-0.1	0	0	0	-0.1	0	0	-0.1	-0.2	0.1	2	0.4	0.3
I	0	0.1	0.3	0.4	-0.3	0.3	0.1	0.1	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	0	-0.5	0.6	0	-0.3
L	0.1	0.1	0.2	0.8	-0.5	0.7	-0.3	0.3	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0.1	-0.1	-0.5	0.3	0	-0.2
V	0	-0.6	0.3	0.7	0.2	0.6	0.3	-0.6	-0.1	0.5	-0.1	0.4	0	-0.2	0.1	0	-0.9	-0.4	0.3	-0.2
M	0	0.8	0.1	0	0	0.7	-0.1	-0.2	0	0	0	-0.1	0	0	0	-0.3	-0.4	-0.2	-0.1	-0.2
W	-0.1	-0.2	-0.2	-0.1	-0.1	-0.2	0	-0.1	0	0	0	0	0	0	0	-0.1	-0.1	0.2	0	0
Y	0	0.4	0.1	-0.7	0.1	0.2	-0.1	-0.1	0	0	0	-0.1	0	0	0	0.1	0.1	-0.3	-0.1	0.2
D	0.5	-1.1	0	-0.1	1	-0.4	-0.3	0	-0.1	-0.1	-0.1	-0.3	0.2	0.2	-0.3	0	0.6	0.1	-0.3	0.5
E	0.4	0.2	0	0	-0.3	-0.2	0.1	-0.3	-0.1	-0.1	0.1	0	-0.1	0.1	0.6	0.4	0.3	-0.3	-0.1	-0.6
K	-0.2	0.9	0.2	-0.1	-0.3	-0.2	-0.5	1.2	-0.1	-0.2	-0.2	0.1	0	-0.1	-0.4	-0.2	-0.4	0.4	-0.1	-0.2
R	0	0.5	0.1	-0.2	-0.2	-0.3	0.1	-0.1	-0.1	0.1	-0.1	0	0.3	0.2	0.1	-0.2	0.1	0	-0.1	0.2
H	-0.2	0.4	-0.6	-0.4	0.3	-0.5	-0.2	-0.2	0.2	-0.1	-0.1	0	-0.1	-0.1	-0.1	0.3	0.2	0.3	-0.2	0.9
N	0.1	0	-0.5	-0.7	-0.1	-0.2	-0.3	0	0	0.2	-0.1	-0.2	-0.1	-0.1	0.1	0.2	1	0.8	0.1	-0.2
Q	0.5	0.3	0.1	0.1	0	-0.1	-0.4	0.1	-0.1	-0.1	0.1	-0.1	-0.2	-0.2	-0.3	0.3	0.8	-0.5	-0.4	-0.1
S	0	-0.3	0	-0.1	0.2	-0.4	0.4	0	0.1	-0.3	-0.1	-0.4	0	0.1	-0.1	0.5	0.5	-0.4	0.3	0.3
T	-0.2	0	0.2	0	0.1	-0.1	0.3	0.9	-0.1	-0.1	-0.2	0.1	-0.2	0	-0.1	0	0.2	-0.5	0.1	0
G	0.6	0.9	0	0.3	-0.3	0.4	-0.3	-0.2	-0.1	-0.1	0.2	-0.1	-0.1	0.4	0	-0.1	-0.2	-0.1	-0.2	-0.8
P	0.1	0	-0.1	-0.1	0.4	-0.2	-0.1	0.2	0	0	0	-0.1	0	0	0	0.1	0.1	-0.2	0	-0.2
C	-0.2	-0.6	0.3	0.7	0.5	0.6	-0.2	-0.5	-0.1	-0.1	-0.1	-0.3	-0.1	-0.1	0	0.2	0.1	-0.7	-0.2	0.7

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0035	1.2	0.1	0.4	0.5	0.7	-0.6	-1.4	-0.4	-0.3	0.1	-0.3	-0.1	-0.2	-0.2	-0.1	1	1	-0.1	-0.5	0.4
0086	1.2	1	1.9	1.9	1.5	1	-1.4	-0.8	-1.1	-1	-1	-0.8	-0.9	-0.8	-1	0.7	0.1	0.1	-0.5	0.5

Select residue pair below:

i_j	Score	Prob
0035_0087	1.980	1.00
0035_0086	1.252	0.99
0035_0304	1.043	0.94
0035_0088	0.753	0.69
0035_0044	0.561	0.37

Local Interactions:

i_j	Score	Prob
0034_0035	1.098	0.96
0033_0035	0.882	0.84
0035_0036	0.781	0.73

See all coupling residues
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