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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [M:0012] and [K:0085]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0.3 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0.3 0 0 0 0 0
I 0 0 0 -0.1 0 0 0 -0.1 0 0 -0.1 0 0 0 0 0.5 0 0 0 0
L 0 -0.1 0 0.3 0.2 0 0 0 0 0 -0.2 -0.1 0 0 0.3 0 -0.1 0 0 0
V 0 -0.2 0 -0.1 0.3 0 0 0 0 0 -0.4 0.5 0 0 0.4 0 -0.1 0 0 -0.1
M 0 -0.2 0 -0.1 -0.1 0 0 -0.1 0 0 0.4 0.2 0 0 0.1 0 0 0 0 -0.1
W 0 0.5 0 -0.1 0.3 0 0 -0.1 0 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0
Y 0 -0.1 0.1 -0.2 -0.2 0 0 -0.1 0 0.3 -0.3 0.4 0 0.2 -0.1 -0.1 0.3 -0.1 0 0.2
D -0.2 -0.1 -0.1 0.1 -0.2 -0.1 0 -0.1 0 -0.1 1.6 -0.1 0 0.1 -0.1 -0.3 -0.1 -0.1 0 -0.1
E -0.2 0.2 0 -0.3 -0.2 -0.2 -0.1 -0.2 -0.1 -0.1 0.4 0.1 -0.1 0.5 -0.3 0.2 0.3 0.4 -0.1 -0.2
K 0 0.2 -0.1 0.4 -0.2 0.5 0 -0.1 0 -0.1 -0.2 -0.1 0 0 -0.1 -0.1 -0.1 0 0 -0.1
R 0 0.2 0 -0.2 0.3 0 0 0.3 0 -0.1 -0.2 -0.1 0 0 -0.1 -0.1 0 0 0 -0.1
H -0.1 0.2 0 -0.2 0.7 -0.2 -0.1 1 -0.1 -0.1 -0.6 0 -0.1 -0.1 -0.3 -0.3 0.2 -0.1 -0.1 0.5
N 0 -0.1 0 0.2 -0.1 0 0 -0.1 0 0 0.1 0.2 0 0 -0.1 0.4 0 0 0 -0.1
Q 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 0.4 -0.2 -0.1 0 -0.1 0.4 -0.1 -0.1 0 0 0.4
S 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 0.2 0.4 0 0 0 0 0 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0.5 -0.1 0.2 0.4 -0.1 -0.1 0 -0.1 0 0 -0.2 -0.1 0 0 -0.1 0.3 -0.1 -0.1 0 -0.1
P 0 -0.1 0 0.3 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 -0.3 0 -0.1 0.1 0.1 -0.1 0.1 0.6 -0.2 0 -0.1 0 0 0.2 0.2 -0.1 -0.3 0.3 -0.1 -0.3
0085 -0.3 0.6 0 0.6 1 -0.2 -0.6 -0.1 -0.6 -0.1 0.2 1 -0.4 0.2 0 -0.1 0 -0.2 -0.6 0.1
Select residue pair below:
i_j Score Prob
0012_0113 1.053 0.45
0012_0042 0.984 0.38
0012_0016 0.964 0.36
0007_0012 0.943 0.34
0012_0154 0.929 0.33
0012_0210 0.821 0.24
0012_0085 0.800 0.23
Local Interactions:
i_j Score Prob
0010_0012 0.993 0.39
0012_0013 0.898 0.30
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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