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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [M:0012] and [V:0042]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F -0.1 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 -0.1
I -0.1 0 0 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0.4 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0.3 -0.1 -0.1 0 -0.1
V 0.6 0 0 -0.1 -0.5 0 0 0 0 0 0 0 0 0.3 0 0.2 -0.1 -0.1 0 -0.1
M -0.2 0 0 -0.1 0.2 0 0 0 0 0 0 0 0 0.4 0 0.2 -0.1 -0.1 0 -0.2
W -0.1 0 0 0.4 -0.2 0 0 0 0 0 0 0 0 0 0 0.2 0.1 -0.1 0 -0.1
Y 0 0 0.3 -0.1 0.3 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.5 -0.1 0 -0.1
D 0.4 0.2 -0.2 0.1 -1 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.3 -0.3 -0.1 1.1
E 0.2 -0.1 0.1 0.5 0.2 0 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 0 0.2 -0.1 -0.3 0.2 0.1 -0.1 -0.6
K -0.1 0 0 0.4 0.5 0 0 0 0 0 0 0 0 0 0 -0.3 -0.1 -0.1 0 -0.1
R -0.2 0 0 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0.8 0 -0.3
H 0.2 0 -0.1 -0.2 -0.3 -0.1 0 0 0 0 0 0 0 -0.1 0.2 0.7 0.1 -0.1 0 -0.1
N -0.1 0 0 -0.1 -0.3 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0.2 -0.1 0 0.8
Q -0.1 0 0 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 -0.1 0.2 -0.1 0 -0.1
S -0.1 0 0 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0.3 -0.1 0.3 -0.1 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 -0.1 0 0.2
P -0.1 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 -0.3 0 -0.1 0.1 0.1 -0.1 0.1 0.6 -0.2 0 -0.1 0 0 0.2 0.2 -0.1 -0.3 0.3 -0.1 -0.3
0042 1.3 -0.3 0.1 0.9 1.3 -0.2 -0.5 -0.5 -0.4 -0.5 -0.5 -0.5 -0.5 0.1 -0.3 0.9 -0.2 0.2 -0.5 0.7
Select residue pair below:
i_j Score Prob
0012_0113 1.053 0.45
0012_0042 0.984 0.38
0012_0016 0.964 0.36
0007_0012 0.943 0.34
0012_0154 0.929 0.33
0012_0210 0.821 0.24
0012_0085 0.800 0.23
Local Interactions:
i_j Score Prob
0010_0012 0.993 0.39
0012_0013 0.898 0.30
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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