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OPENSEQ.org
YAHN - Uncharacterized membrane protein YahN
UniProt: P75693 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13598
Length: 223 (203)
Sequences: 4731
Seq/Len: 23.31
YAHN
Paralog alert: 0.75 [within 20: 0.24] - ratio of genomes with paralogs
Cluster includes: EAMB LEUE RHTB RHTC YAHN
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
62_L 128_F 5.183 1.00
101_A 209_G 3.315 1.00
101_A 205_G 2.934 1.00
199_V 202_R 2.881 1.00
102_W 106_R 2.702 1.00
87_S 90_R 2.635 1.00
91_I 95_A 2.633 1.00
45_S 53_G 2.614 1.00
66_F 132_L 2.441 1.00
40_V 56_T 2.351 1.00
173_S 177_R 2.322 1.00
98_L 212_A 2.263 1.00
132_L 136_L 2.226 1.00
98_L 209_G 2.173 1.00
98_L 102_W 2.022 1.00
64_D 135_D 1.906 1.00
91_I 216_I 1.905 1.00
37_N 60_V 1.826 1.00
159_T 162_R 1.806 1.00
87_S 91_I 1.789 1.00
105_M 202_R 1.782 1.00
206_A 210_V 1.778 1.00
44_T 48_S 1.745 1.00
41_V 45_S 1.713 1.00
26_L 148_I 1.711 1.00
103_C 106_R 1.688 1.00
20_V 168_G 1.665 1.00
37_N 135_D 1.655 1.00
58_L 128_F 1.619 1.00
77_T 81_Q 1.61 1.00
94_G 212_A 1.608 1.00
91_I 94_G 1.603 1.00
94_G 216_I 1.594 1.00
198_R 202_R 1.56 1.00
56_T 131_G 1.521 1.00
105_M 205_G 1.503 1.00
101_A 212_A 1.499 1.00
188_A 192_A 1.43 1.00
84_E 87_S 1.427 1.00
40_V 134_T 1.412 1.00
37_N 64_D 1.395 0.99
129_R 133_I 1.383 0.99
44_T 130_R 1.368 0.99
44_T 56_T 1.347 0.99
69_G 73_F 1.346 0.99
86_F 90_R 1.345 0.99
96_Y 100_F 1.329 0.99
84_E 88_L 1.326 0.99
53_G 57_G 1.311 0.99
82_C 86_F 1.303 0.99
171_L 175_I 1.288 0.99
37_N 134_T 1.276 0.99
67_Y 135_D 1.244 0.98
125_Y 129_R 1.236 0.98
199_V 203_V 1.234 0.98
64_D 141_T 1.223 0.98
180_L 184_F 1.223 0.98
52_A 127_F 1.217 0.98
182_Q 186_L 1.201 0.98
193_Y 196_M 1.193 0.98
202_R 206_A 1.172 0.98
39_F 43_Q 1.167 0.97
96_Y 99_W 1.16 0.97
173_S 176_W 1.152 0.97
158_P 161_A 1.141 0.97
154_N 157_T 1.137 0.97
128_F 132_L 1.119 0.96
137_S 146_I 1.104 0.96
184_F 187_P 1.101 0.96
169_I 173_S 1.083 0.96
88_L 91_I 1.071 0.95
68_S 145_F 1.069 0.95
79_I 82_C 1.067 0.95
200_A 204_I 1.058 0.95
175_I 179_F 1.051 0.94
37_N 141_T 1.051 0.94
181_S 185_S 1.049 0.94
62_L 66_F 1.044 0.94
172_A 176_W 1.042 0.94
99_W 103_C 1.04 0.94
186_L 190_R 1.036 0.94
62_L 132_L 1.036 0.94
30_T 148_I 1.024 0.93
67_Y 142_V 1.016 0.93
38_L 134_T 1.013 0.93
186_L 189_V 1.008 0.93
126_V 129_R 1.004 0.93
41_V 60_V 1.003 0.93
211_F 214_R 1.003 0.93
37_N 173_S 1 0.92
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
2m67A10.34981.20.966Contact Map0.179
2h3oA10.260110.968Contact Map0.155
2mc7A10.125610.968Contact Map0.567
3h90A40.40810.90.97Contact Map0.483
3j1zP20.43950.90.97Contact Map0.442
2lk9A10.1570.80.97Contact Map0
2qpwA10.21520.80.97Contact Map0
1iijA10.1570.80.971Contact Map0.505
1bzkA10.19280.70.971Contact Map0.072
2wdqD30.32290.70.971Contact Map0.492
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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