May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PGMB - PUUB
UniProt: P77366 - P37906
Length: 645
Sequences: 622
Seq/Len: 1.04
I_Prob: 0.00

PGMB - Beta-phosphoglucomutase
Paralog alert: 0.91 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG
PUUB - Gamma-glutamylputrescine oxidoreductase
Paralog alert: 0.68 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: DADA LHGO MTOX PUUB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
100_S 57_E 1.18 0.00
142_Q 172_A 1.01 0.00
102_L 322_K 0.96 0.00
177_I 56_L 0.91 0.00
132_E 199_G 0.90 0.00
190_I 132_K 0.90 0.00
142_Q 32_V 0.89 0.00
106_R 250_S 0.88 0.00
119_L 206_A 0.88 0.00
113_G 260_T 0.87 0.00
110_I 156_D 0.86 0.00
4_Q 56_L 0.84 0.00
170_I 222_K 0.82 0.00
168_I 158_N 0.82 0.00
110_I 157_A 0.82 0.00
43_S 35_G 0.82 0.00
15_T 221_A 0.81 0.00
135_T 153_E 0.80 0.00
32_I 30_V 0.80 0.00
182_A 375_G 0.79 0.00
32_I 35_G 0.77 0.00
122_P 220_T 0.77 0.00
84_H 112_K 0.76 0.00
116_S 238_L 0.75 0.00
132_E 35_G 0.75 0.00
113_G 142_E 0.75 0.00
29_A 371_T 0.74 0.00
201_L 93_A 0.74 0.00
37_D 214_T 0.73 0.00
180_I 166_S 0.73 0.00
108_Q 35_G 0.72 0.00
152_I 371_T 0.71 0.00
74_L 252_P 0.70 0.00
101_L 33_V 0.70 0.00
3_L 35_G 0.70 0.00
116_S 292_A 0.70 0.00
182_A 98_S 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 2.1184 seconds.