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OPENSEQ.org

HLDD - WAAU
UniProt: P67910 - P27242
Length: 667
Sequences: 554
Seq/Len: 0.90
I_Prob: 0.00

HLDD - ADP-L-glycero-D-manno-heptose-6-epimerase
Paralog alert: 0.91 [within 20: 0.60] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
WAAU - Lipopolysaccharide 1,2-N-acetylglucosaminetransferase
Paralog alert: 0.74 [within 20: 0.42] - ratio of genomes with paralogs
Cluster includes: RFAC RFAF RFAQ WAAU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_I 180_Y 1.28 0.00
212_V 211_V 1.05 0.00
281_T 342_E 0.97 0.00
116_S 92_E 0.97 0.00
72_I 156_F 0.96 0.00
60_I 293_I 0.96 0.00
4_V 90_I 0.91 0.00
27_I 111_L 0.88 0.00
279_D 231_V 0.84 0.00
108_E 136_S 0.83 0.00
246_V 184_K 0.83 0.00
295_V 167_H 0.82 0.00
245_A 108_C 0.82 0.00
30_V 302_L 0.80 0.00
151_V 107_L 0.80 0.00
130_S 342_E 0.79 0.00
304_A 41_K 0.78 0.00
259_I 227_E 0.78 0.00
294_T 232_I 0.78 0.00
232_I 74_L 0.78 0.00
116_S 104_M 0.77 0.00
308_R 72_I 0.76 0.00
21_D 113_D 0.75 0.00
245_A 106_T 0.75 0.00
300_T 328_Q 0.75 0.00
218_A 250_L 0.75 0.00
308_R 269_E 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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