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OPENSEQ.org

FIXA - MENE
UniProt: P60566 - P37353
Length: 707
Sequences: 421
Seq/Len: 0.61
I_Prob: 0.00

FIXA - Protein FixA
Paralog alert: 0.38 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FIXA YDIQ YGCR
MENE - 2-succinylbenzoate--CoA ligase
Paralog alert: 0.84 [within 20: 0.45] - ratio of genomes with paralogs
Cluster includes: ACSA CAIC ENTE FADK LCFA MENE PRPE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
249_A 103_A 1.24 0.00
116_I 398_M 1.19 0.00
55_A 383_V 0.99 0.00
115_L 149_P 0.97 0.00
178_V 103_A 0.96 0.00
135_G 39_E 0.95 0.00
169_T 300_I 0.95 0.00
155_D 272_T 0.94 0.00
178_V 367_V 0.94 0.00
3_I 72_L 0.93 0.00
178_V 382_I 0.92 0.00
42_I 385_V 0.90 0.00
139_N 98_L 0.89 0.00
61_S 307_L 0.89 0.00
178_V 139_M 0.89 0.00
177_V 47_Q 0.88 0.00
61_S 89_P 0.87 0.00
240_D 26_E 0.87 0.00
57_V 145_S 0.87 0.00
103_A 205_V 0.86 0.00
153_T 264_R 0.86 0.00
57_V 329_E 0.84 0.00
3_I 53_S 0.82 0.00
88_I 175_H 0.82 0.00
110_K 318_R 0.82 0.00
42_I 300_I 0.82 0.00
146_V 438_I 0.82 0.00
67_L 178_W 0.82 0.00
149_I 220_H 0.82 0.00
245_I 406_D 0.81 0.00
58_T 344_K 0.81 0.00
90_D 427_L 0.81 0.00
6_C 135_R 0.79 0.00
139_N 424_W 0.79 0.00
152_L 29_N 0.78 0.00
55_A 91_L 0.78 0.00
42_I 155_T 0.78 0.00
245_I 438_I 0.78 0.00
106_A 164_Q 0.78 0.00
196_L 362_I 0.77 0.00
177_V 409_E 0.77 0.00
4_I 91_L 0.76 0.00
64_G 301_V 0.76 0.00
74_K 377_V 0.76 0.00
173_P 17_E 0.75 0.00
174_L 374_H 0.75 0.00
215_A 204_T 0.75 0.00
117_L 308_R 0.74 0.00
172_I 407_L 0.74 0.00
45_A 141_L 0.74 0.00
154_A 320_G 0.74 0.00
155_D 300_I 0.74 0.00
103_A 221_A 0.73 0.00
117_L 227_Q 0.73 0.00
117_L 19_I 0.73 0.00
23_G 416_A 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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