May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RFBX - YEEZ
UniProt: P37746 - P0AD12
Length: 689
Sequences: 3224
Seq/Len: 4.78
I_Prob: 0.00
RFBX - Putative O-antigen transporter
Paralog alert: 0.91 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: DINF MDTK MURJ RFBX WZXC WZXE YEEO YGHQ 		YEEZ - Protein YeeZ
Paralog alert: 0.91 [within 20: 0.64] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
283_R 95_L 0.72 0.00
395_T 72_L 0.67 0.00
98_I 263_Y 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.6328 seconds.