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CCMA - CCMF
UniProt: P33931 - P33927
Length: 854
Sequences: 532
Seq/Len: 0.63
I_Prob: 0.00

CCMA - Cytochrome c biogenesis ATP-binding export protein CcmA
Paralog alert: 0.94 [within 20: 0.86] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
CCMF - Cytochrome c-type biogenesis protein CcmF
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CCMF NRFE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
60_V 528_F 1.20 0.00
92_T 435_V 1.19 0.00
43_T 81_V 1.16 0.00
170_R 578_A 1.13 0.00
129_L 223_I 1.10 0.00
92_T 589_A 1.09 0.00
44_T 38_S 1.03 0.00
182_I 58_V 0.99 0.00
44_T 155_P 0.99 0.00
60_V 618_L 0.98 0.00
26_L 5_I 0.98 0.00
102_R 625_L 0.97 0.00
144_L 411_L 0.97 0.00
43_T 390_F 0.96 0.00
26_L 625_L 0.95 0.00
40_A 392_N 0.94 0.00
23_S 549_G 0.92 0.00
46_L 405_L 0.92 0.00
67_L 498_I 0.91 0.00
168_T 587_L 0.90 0.00
111_E 501_I 0.90 0.00
13_R 86_A 0.90 0.00
93_A 558_T 0.89 0.00
28_A 214_A 0.88 0.00
15_E 610_V 0.88 0.00
23_S 59_N 0.88 0.00
181_V 408_V 0.88 0.00
157_T 155_P 0.87 0.00
185_T 145_N 0.87 0.00
25_T 433_T 0.87 0.00
123_D 406_L 0.87 0.00
55_P 617_G 0.86 0.00
15_E 43_A 0.85 0.00
185_T 255_V 0.85 0.00
201_L 435_V 0.85 0.00
92_T 85_V 0.84 0.00
131_A 392_N 0.84 0.00
23_S 13_A 0.84 0.00
148_T 519_D 0.83 0.00
117_G 186_V 0.83 0.00
46_L 316_L 0.83 0.00
50_T 444_F 0.83 0.00
199_I 467_I 0.83 0.00
185_T 485_W 0.82 0.00
182_I 42_F 0.81 0.00
60_V 398_L 0.81 0.00
159_I 196_L 0.81 0.00
134_Q 390_F 0.81 0.00
185_T 588_Y 0.81 0.00
180_I 625_L 0.81 0.00
25_T 66_F 0.80 0.00
44_T 22_V 0.80 0.00
185_T 433_T 0.80 0.00
4_L 249_S 0.79 0.00
134_Q 332_A 0.79 0.00
44_T 561_Y 0.79 0.00
112_A 459_A 0.79 0.00
51_G 384_I 0.79 0.00
149_L 584_T 0.78 0.00
92_T 328_L 0.78 0.00
173_Q 157_E 0.78 0.00
100_Y 429_A 0.78 0.00
185_T 46_L 0.78 0.00
83_H 223_I 0.78 0.00
197_R 533_V 0.78 0.00
12_E 127_A 0.78 0.00
99_F 337_V 0.78 0.00
94_L 621_A 0.77 0.00
167_L 442_W 0.77 0.00
70_V 17_A 0.77 0.00
108_Q 553_D 0.77 0.00
65_Q 5_I 0.77 0.00
60_V 563_E 0.77 0.00
122_E 435_V 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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