May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PSPE - TPX
UniProt: P23857 - P0A862
Length: 272
Sequences: 272
Seq/Len: 1.16
I_Prob: 0.00

PSPE - Thiosulfate sulfurtransferase PspE
Paralog alert: 0.66 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: GLPE PSPE YIBN
TPX - Thiol peroxidase
Paralog alert: 0.86 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
93_G 50_L 1.12 0.00
43_I 136_V 1.06 0.00
85_Y 36_S 1.00 0.00
63_V 89_F 0.97 0.00
29_P 106_L 0.94 0.00
22_H 81_L 0.93 0.00
24_I 113_E 0.92 0.00
40_A 43_F 0.92 0.00
48_V 29_T 0.91 0.00
26_V 35_L 0.90 0.00
73_S 24_K 0.88 0.00
66_Y 27_T 0.87 0.00
41_I 146_F 0.87 0.00
78_E 106_L 0.84 0.00
23_W 37_D 0.83 0.00
23_W 103_V 0.82 0.00
61_D 166_L 0.80 0.00
26_V 49_V 0.80 0.00
52_I 48_K 0.80 0.00
23_W 24_K 0.80 0.00
65_V 48_K 0.79 0.00
41_I 162_A 0.79 0.00
40_A 68_F 0.78 0.00
23_W 130_L 0.78 0.00
24_I 144_V 0.78 0.00
86_T 67_K 0.78 0.00
83_M 21_A 0.76 0.00
64_K 83_I 0.76 0.00
32_Y 49_V 0.76 0.00
86_T 29_T 0.76 0.00
55_A 77_N 0.73 0.00
47_E 165_V 0.73 0.00
33_Q 74_E 0.72 0.00
88_V 49_V 0.72 0.00
63_V 90_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3128 seconds.