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OPENSEQ.org

PROV - PROX
UniProt: P14175 - P0AFM2
Length: 730
Sequences: 519
Seq/Len: 0.75
I_Prob: 0.00

PROV - Glycine betaine/L-proline transport ATP-binding protein ProV
Paralog alert: 0.38 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
PROX - Glycine betaine-binding periplasmic protein
Paralog alert: 0.22 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: PROX
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_L 66_D 1.28 0.00
48_S 73_S 1.19 0.00
96_S 30_T 1.13 0.00
27_Q 131_N 1.12 0.00
229_M 281_L 1.11 0.00
236_A 293_M 1.11 0.00
319_K 193_D 1.11 0.00
222_S 84_V 1.06 0.00
188_M 160_G 1.06 0.00
226_D 187_Y 1.05 0.00
20_R 58_T 1.05 0.00
47_A 263_K 1.03 0.00
125_D 316_Q 1.02 0.00
158_A 40_E 1.02 0.00
279_I 291_A 1.02 0.00
46_D 51_A 1.02 0.00
78_I 321_W 1.00 0.00
75_N 160_G 0.99 0.00
85_V 272_A 0.99 0.00
76_R 215_S 0.99 0.00
9_N 76_S 0.98 0.00
185_I 254_V 0.98 0.00
191_A 167_I 0.98 0.00
350_V 175_E 0.97 0.00
108_I 65_V 0.97 0.00
157_Y 159_P 0.97 0.00
208_V 88_P 0.97 0.00
253_L 187_Y 0.96 0.00
183_P 226_W 0.96 0.00
39_G 65_V 0.95 0.00
124_L 33_P 0.95 0.00
87_I 300_E 0.95 0.00
390_R 129_I 0.94 0.00
78_I 116_G 0.94 0.00
114_S 270_P 0.94 0.00
231_I 202_K 0.94 0.00
159_H 178_N 0.94 0.00
38_T 116_G 0.93 0.00
274_F 105_R 0.92 0.00
380_V 47_L 0.92 0.00
191_A 162_G 0.91 0.00
219_V 254_V 0.91 0.00
219_V 317_Q 0.91 0.00
185_I 27_K 0.91 0.00
164_E 281_L 0.91 0.00
383_I 104_Y 0.90 0.00
8_K 99_G 0.90 0.00
69_T 29_I 0.90 0.00
79_E 284_A 0.90 0.00
169_M 227_L 0.89 0.00
375_E 204_V 0.89 0.00
74_L 217_E 0.89 0.00
27_Q 96_A 0.89 0.00
103_V 310_W 0.89 0.00
185_I 163_C 0.89 0.00
69_T 203_P 0.89 0.00
153_G 48_V 0.89 0.00
55_E 119_I 0.89 0.00
280_A 117_Y 0.88 0.00
128_A 33_P 0.88 0.00
116_A 230_P 0.88 0.00
13_I 56_G 0.88 0.00
78_I 215_S 0.88 0.00
11_Y 108_V 0.88 0.00
81_T 263_K 0.88 0.00
212_A 61_K 0.87 0.00
211_Q 311_I 0.87 0.00
51_I 77_G 0.87 0.00
85_V 168_N 0.87 0.00
159_H 284_A 0.87 0.00
237_I 51_A 0.87 0.00
58_V 186_N 0.86 0.00
378_Q 319_D 0.86 0.00
274_F 259_I 0.86 0.00
215_Q 317_Q 0.86 0.00
251_E 49_S 0.86 0.00
392_L 159_P 0.86 0.00
31_K 160_G 0.86 0.00
230_R 217_E 0.85 0.00
10_L 177_T 0.85 0.00
150_R 58_T 0.85 0.00
226_D 290_N 0.85 0.00
236_A 189_A 0.85 0.00
178_A 227_L 0.85 0.00
147_D 56_G 0.85 0.00
203_M 193_D 0.85 0.00
125_D 181_T 0.85 0.00
319_K 73_S 0.84 0.00
48_S 78_D 0.84 0.00
238_M 213_W 0.84 0.00
238_M 57_Y 0.84 0.00
43_G 110_V 0.84 0.00
48_S 172_A 0.83 0.00
96_S 125_D 0.83 0.00
249_P 50_R 0.83 0.00
185_I 171_L 0.83 0.00
43_G 307_V 0.83 0.00
226_D 65_V 0.83 0.00
230_R 322_V 0.83 0.00
19_Q 314_H 0.83 0.00
136_I 236_G 0.83 0.00
270_I 84_V 0.83 0.00
109_A 273_A 0.83 0.00
338_G 73_S 0.83 0.00
36_E 202_K 0.82 0.00
271_S 214_V 0.82 0.00
51_I 314_H 0.82 0.00
76_R 116_G 0.82 0.00
31_K 65_V 0.82 0.00
30_S 30_T 0.82 0.00
27_Q 175_E 0.82 0.00
314_I 151_K 0.82 0.00
186_L 227_L 0.82 0.00
127_T 180_V 0.81 0.00
249_P 53_E 0.81 0.00
214_H 257_M 0.81 0.00
188_M 132_I 0.81 0.00
251_E 107_G 0.81 0.00
109_A 125_D 0.81 0.00
371_P 42_T 0.81 0.00
8_K 201_G 0.81 0.00
377_Q 192_A 0.81 0.00
151_Q 310_W 0.80 0.00
236_A 306_H 0.80 0.00
191_A 128_K 0.80 0.00
258_N 193_D 0.80 0.00
109_A 61_K 0.80 0.00
191_A 255_S 0.80 0.00
225_L 160_G 0.80 0.00
85_V 182_H 0.80 0.00
389_L 257_M 0.80 0.00
249_P 267_E 0.80 0.00
140_E 129_I 0.80 0.00
358_E 34_V 0.80 0.00
184_D 67_Y 0.80 0.00
85_V 50_R 0.80 0.00
164_E 128_K 0.80 0.00
201_T 279_M 0.80 0.00
249_P 78_D 0.79 0.00
274_F 36_S 0.79 0.00
31_K 116_G 0.79 0.00
356_L 267_E 0.79 0.00
149_L 255_S 0.79 0.00
230_R 189_A 0.79 0.00
237_I 275_L 0.79 0.00
222_S 286_I 0.79 0.00
59_I 90_H 0.78 0.00
140_E 134_Q 0.78 0.00
243_V 314_H 0.78 0.00
88_D 185_G 0.78 0.00
209_K 218_L 0.78 0.00
129_F 269_N 0.78 0.00
222_S 167_I 0.78 0.00
267_G 286_I 0.78 0.00
102_E 273_A 0.78 0.00
75_N 132_I 0.78 0.00
74_L 205_F 0.78 0.00
377_Q 313_A 0.78 0.00
229_M 215_S 0.78 0.00
249_P 42_T 0.77 0.00
232_G 227_L 0.77 0.00
13_I 288_A 0.77 0.00
278_D 192_A 0.77 0.00
258_N 31_V 0.77 0.00
356_L 79_A 0.77 0.00
73_L 185_G 0.77 0.00
164_E 193_D 0.77 0.00
49_L 186_N 0.77 0.00
259_D 76_S 0.77 0.00
207_L 80_T 0.77 0.00
169_M 174_Y 0.77 0.00
226_D 45_T 0.77 0.00
11_Y 265_W 0.77 0.00
140_E 96_A 0.76 0.00
81_T 248_A 0.76 0.00
30_S 320_G 0.76 0.00
82_R 314_H 0.76 0.00
136_I 96_A 0.76 0.00
75_N 227_L 0.76 0.00
303_L 224_V 0.76 0.00
71_V 70_G 0.76 0.00
134_A 188_A 0.76 0.00
49_L 73_S 0.76 0.00
123_V 192_A 0.76 0.00
250_D 135_L 0.76 0.00
123_V 275_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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