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OPENSEQ.org
NUOH - NUON
UniProt: P0AFD4 - P0AFF0
Length: 810
Sequences: 1488
Seq/Len: 2.06
I_Prob: 0.00
NUOH - NADH-quinone oxidoreductase subunit H
Paralog alert: 0.24 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: HYCD HYFC NUOH 		NUON - NADH-quinone oxidoreductase subunit N
Paralog alert: 0.84 [within 20: 0.59] - ratio of genomes with paralogs
Cluster includes: HYCC HYFB HYFD HYFF NUOL NUOM NUON
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
4he8HC:LF:MG:NI:KEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
283_I 67_M 0.98 0.00
133_A 370_P 0.97 0.00
68_F 73_A 0.95 0.00
235_G 287_M 0.94 0.00
55_G 326_V 0.92 0.00
139_N 70_D 0.91 0.00
121_M 399_L 0.91 0.00
308_L 183_D 0.90 0.00
101_V 82_L 0.89 0.00
257_F 255_M 0.86 0.00
80_R 170_L 0.84 0.00
243_I 306_L 0.84 0.00
277_F 412_G 0.84 0.00
197_I 458_L 0.82 0.00
134_G 330_L 0.82 0.00
165_M 128_L 0.81 0.00
116_I 279_A 0.80 0.00
150_S 126_A 0.79 0.00
221_L 170_L 0.79 0.00
133_A 379_M 0.79 0.00
163_S 122_A 0.79 0.00
199_F 181_S 0.79 0.00
272_A 282_I 0.79 0.00
257_F 188_A 0.78 0.00
284_L 422_L 0.77 0.00
169_A 292_T 0.77 0.00
302_W 424_Y 0.77 0.00
230_S 206_G 0.77 0.00
201_I 124_H 0.76 0.00
141_Y 303_I 0.76 0.00
230_S 67_M 0.76 0.00
281_M 325_A 0.75 0.00
118_F 177_V 0.74 0.00
200_A 466_V 0.74 0.00
99_A 80_V 0.74 0.00
146_A 417_G 0.74 0.00
217_A 168_S 0.74 0.00
20_V 458_L 0.73 0.00
197_I 200_E 0.73 0.00
88_M 156_S 0.73 0.00
221_L 96_E 0.73 0.00
294_Y 247_K 0.73 0.00
128_Y 247_K 0.72 0.00
38_R 156_S 0.72 0.00
273_L 331_A 0.72 0.00
119_F 432_L 0.72 0.00
265_L 386_I 0.72 0.00
18_A 412_G 0.72 0.00
57_S 328_V 0.72 0.00
147_M 425_Y 0.72 0.00
154_L 392_F 0.71 0.00
282_F 359_L 0.71 0.00
225_Y 354_P 0.71 0.00
39_L 389_T 0.71 0.00
28_C 183_D 0.71 0.00
178_D 126_A 0.71 0.00
60_L 221_V 0.71 0.00
16_L 455_I 0.71 0.00
38_R 67_M 0.71 0.00
80_R 367_W 0.71 0.00
73_W 276_I 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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