May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FABF - FABZ
UniProt: P0AAI5 - P0A6Q6
Length: 564
Sequences: 412
Seq/Len: 0.75
I_Prob: 0.00

FABF - 3-oxoacyl-[acyl-carrier-protein] synthase 2
Paralog alert: 0.57 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: FABB FABF
FABZ - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
Paralog alert: 0.18 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: FABA FABZ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
135_V 139_C 1.25 0.00
82_G 67_L 0.97 0.00
78_G 70_M 0.95 0.00
62_I 31_D 0.94 0.00
188_A 60_I 0.94 0.00
86_M 29_V 0.90 0.00
191_A 28_R 0.90 0.00
330_V 23_F 0.90 0.00
8_V 112_I 0.88 0.00
48_T 17_L 0.88 0.00
289_R 73_A 0.88 0.00
322_I 67_L 0.86 0.00
352_I 100_R 0.85 0.00
408_L 116_T 0.85 0.00
4_R 45_S 0.84 0.00
167_G 60_I 0.84 0.00
148_T 25_L 0.83 0.00
27_A 26_V 0.82 0.00
237_G 134_D 0.81 0.00
251_G 57_G 0.81 0.00
136_P 20_R 0.80 0.00
225_K 140_E 0.80 0.00
298_I 10_I 0.80 0.00
44_S 12_E 0.78 0.00
386_R 36_R 0.78 0.00
293_I 137_V 0.78 0.00
236_A 37_F 0.78 0.00
28_L 99_A 0.78 0.00
292_G 116_T 0.77 0.00
74_F 23_F 0.77 0.00
14_L 139_C 0.77 0.00
290_D 13_I 0.77 0.00
56_D 32_F 0.77 0.00
281_A 103_R 0.76 0.00
121_S 125_T 0.76 0.00
361_Q 47_N 0.76 0.00
71_M 144_M 0.76 0.00
303_A 145_C 0.75 0.00
391_M 130_V 0.75 0.00
298_I 126_R 0.74 0.00
331_L 106_V 0.74 0.00
258_L 111_M 0.74 0.00
201_G 92_Y 0.74 0.00
84_Q 50_F 0.74 0.00
332_V 23_F 0.74 0.00
28_L 146_A 0.73 0.00
8_V 130_V 0.72 0.00
338_M 26_V 0.72 0.00
249_K 120_T 0.72 0.00
281_A 131_A 0.72 0.00
363_V 138_V 0.72 0.00
147_L 26_V 0.72 0.00
258_L 105_V 0.71 0.00
149_I 93_F 0.71 0.00
59_C 29_V 0.70 0.00
151_Y 99_A 0.70 0.00
249_K 105_V 0.70 0.00
333_S 52_Q 0.70 0.00
319_V 138_V 0.70 0.00
154_R 39_R 0.69 0.00
357_A 28_R 0.69 0.00
258_L 36_R 0.69 0.00
73_A 26_V 0.69 0.00
317_Q 26_V 0.69 0.00
388_V 8_L 0.69 0.00
237_G 26_V 0.69 0.00
307_S 90_L 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.6528 seconds.