| UniProt: | Q79E92 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14418 | ||
| Length: | 112 (93) | ||
| Sequences: | 1155 | ||
| Seq/Len: | 12.42 |
| YKGN
Paralog alert: 0.61 [within 20: 0.11] - ratio of genomes with paralogs Cluster includes: INSE1 INSE2 INSE3 INSE4 INSE5 INSN2 YKGN |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 69_E | 74_T | 4.908 | 1.00 | |
| 62_E | 67_Q | 4.471 | 1.00 | |
| 70_L | 73_V | 4.328 | 1.00 | |
| 14_A | 32_L | 2.663 | 1.00 | |
| 14_A | 39_L | 2.207 | 1.00 | |
| 66_L | 70_L | 2.153 | 1.00 | |
| 8_E | 12_T | 2.125 | 1.00 | |
| 37_H | 40_Y | 1.994 | 1.00 | |
| 62_E | 65_R | 1.943 | 1.00 | |
| 26_A | 30_T | 1.897 | 1.00 | |
| 59_A | 63_I | 1.868 | 1.00 | |
| 41_A | 45_K | 1.835 | 1.00 | |
| 18_V | 43_I | 1.687 | 1.00 | |
| 85_V | 88_I | 1.658 | 1.00 | |
| 61_A | 65_R | 1.632 | 1.00 | |
| 84_A | 88_I | 1.615 | 1.00 | |
| 25_V | 40_Y | 1.586 | 1.00 | |
| 16_K | 20_D | 1.563 | 1.00 | |
| 83_A | 87_S | 1.503 | 1.00 | |
| 83_A | 86_D | 1.482 | 1.00 | |
| 55_E | 60_Q | 1.397 | 0.99 | |
| 35_T | 38_S | 1.392 | 0.99 | |
| 63_I | 67_Q | 1.36 | 0.99 | |
| 12_T | 16_K | 1.311 | 0.99 | |
| 65_R | 69_E | 1.288 | 0.99 | |
| 56_Q | 60_Q | 1.281 | 0.99 | |
| 63_I | 66_L | 1.265 | 0.99 | |
| 72_R | 75_D | 1.248 | 0.99 | |
| 60_Q | 63_I | 1.246 | 0.98 | |
| 78_D | 82_K | 1.234 | 0.98 | |
| 75_D | 82_K | 1.19 | 0.98 | |
| 73_V | 77_R | 1.19 | 0.98 | |
| 75_D | 79_I | 1.156 | 0.97 | |
| 89_C | 93_T | 1.151 | 0.97 | |
| 13_E | 16_K | 1.149 | 0.97 | |
| 83_A | 88_I | 1.147 | 0.97 | |
| 56_Q | 59_A | 1.144 | 0.97 | |
| 17_Q | 28_V | 1.14 | 0.97 | |
| 79_I | 83_A | 1.075 | 0.95 | |
| 27_S | 31_R | 1.061 | 0.95 | |
| 37_H | 41_A | 1.02 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2rn7A | 1 | 0.8661 | 99.8 | 0.36 | Contact Map | 0.304 |
| 2jn6A | 1 | 0.8214 | 99.6 | 0.44 | Contact Map | 0.447 |
| 1hlvA | 1 | 0.9018 | 98.9 | 0.612 | Contact Map | 0.58 |
| 2elhA | 1 | 0.625 | 98.7 | 0.641 | Contact Map | 0.184 |
| 2oa4A | 1 | 0.6518 | 98.6 | 0.657 | Contact Map | 0.666 |
| 2ao9A | 9 | 0.8839 | 98.5 | 0.664 | Contact Map | 0.55 |
| 2gloA | 1 | 0.4911 | 98.5 | 0.667 | Contact Map | 0.807 |
| 1pdnC | 1 | 0.9286 | 98.3 | 0.678 | Contact Map | 0.833 |
| 2k27A | 1 | 0.9286 | 98.3 | 0.683 | Contact Map | 0.45 |
| 4dyqA | 2 | 0.8482 | 98.2 | 0.692 | Contact Map | 0.567 |
Sequence Conservation (Image Generated using WebLogo v3)