| UniProt: | Q47685 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14331 | ||
| Length: | 158 (137) | ||
| Sequences: | 1811 | ||
| Seq/Len: | 13.22 |
| YKFG
Paralog alert: 0.27 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: YEES YFJY YICR YKFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 105_L | 138_V | 2.953 | 1.00 | |
| 74_E | 94_R | 2.602 | 1.00 | |
| 92_V | 131_L | 2.592 | 1.00 | |
| 65_D | 69_Q | 2.551 | 1.00 | |
| 150_Y | 155_H | 2.533 | 1.00 | |
| 47_L | 106_A | 2.444 | 1.00 | |
| 121_K | 152_F | 2.432 | 1.00 | |
| 81_I | 101_A | 2.127 | 1.00 | |
| 121_K | 157_L | 1.989 | 1.00 | |
| 37_F | 70_L | 1.944 | 1.00 | |
| 56_R | 78_T | 1.909 | 1.00 | |
| 51_M | 54_L | 1.901 | 1.00 | |
| 105_L | 127_L | 1.873 | 1.00 | |
| 128_V | 138_V | 1.796 | 1.00 | |
| 125_Q | 129_Q | 1.78 | 1.00 | |
| 118_Q | 122_T | 1.731 | 1.00 | |
| 66_N | 82_N | 1.726 | 1.00 | |
| 93_K | 99_N | 1.671 | 1.00 | |
| 24_R | 28_R | 1.663 | 1.00 | |
| 63_Y | 94_R | 1.651 | 1.00 | |
| 75_T | 78_T | 1.644 | 1.00 | |
| 38_T | 42_A | 1.632 | 1.00 | |
| 72_A | 98_F | 1.612 | 1.00 | |
| 62_L | 70_L | 1.594 | 1.00 | |
| 91_V | 127_L | 1.589 | 1.00 | |
| 60_R | 75_T | 1.585 | 1.00 | |
| 124_T | 141_H | 1.578 | 1.00 | |
| 60_R | 73_H | 1.572 | 1.00 | |
| 58_E | 75_T | 1.548 | 1.00 | |
| 40_T | 154_E | 1.543 | 1.00 | |
| 55_E | 93_K | 1.506 | 1.00 | |
| 92_V | 134_V | 1.462 | 1.00 | |
| 95_A | 103_V | 1.449 | 1.00 | |
| 41_H | 45_E | 1.446 | 1.00 | |
| 63_Y | 98_F | 1.422 | 1.00 | |
| 118_Q | 121_K | 1.414 | 1.00 | |
| 51_M | 60_R | 1.409 | 1.00 | |
| 59_F | 138_V | 1.407 | 0.99 | |
| 95_A | 136_I | 1.4 | 0.99 | |
| 77_F | 84_T | 1.396 | 0.99 | |
| 129_Q | 132_Q | 1.396 | 0.99 | |
| 52_A | 146_G | 1.393 | 0.99 | |
| 56_R | 77_F | 1.377 | 0.99 | |
| 94_R | 98_F | 1.364 | 0.99 | |
| 114_T | 148_Q | 1.34 | 0.99 | |
| 67_Q | 113_E | 1.338 | 0.99 | |
| 94_R | 97_H | 1.334 | 0.99 | |
| 152_F | 158_L | 1.306 | 0.99 | |
| 54_L | 58_E | 1.305 | 0.99 | |
| 152_F | 157_L | 1.3 | 0.99 | |
| 86_V | 123_L | 1.279 | 0.99 | |
| 128_V | 132_Q | 1.274 | 0.99 | |
| 143_I | 150_Y | 1.272 | 0.99 | |
| 114_T | 150_Y | 1.268 | 0.99 | |
| 59_F | 86_V | 1.268 | 0.99 | |
| 68_N | 102_A | 1.259 | 0.99 | |
| 63_Y | 74_E | 1.252 | 0.99 | |
| 58_E | 78_T | 1.238 | 0.98 | |
| 50_H | 73_H | 1.209 | 0.98 | |
| 115_T | 155_H | 1.148 | 0.97 | |
| 142_L | 149_I | 1.119 | 0.96 | |
| 130_V | 134_V | 1.09 | 0.96 | |
| 80_T | 90_E | 1.083 | 0.96 | |
| 52_A | 145_G | 1.082 | 0.96 | |
| 22_A | 25_A | 1.082 | 0.96 | |
| 150_Y | 157_L | 1.074 | 0.95 | |
| 37_F | 43_V | 1.072 | 0.95 | |
| 80_T | 87_H | 1.066 | 0.95 | |
| 63_Y | 95_A | 1.063 | 0.95 | |
| 48_R | 147_R | 1.016 | 0.93 | |
| 54_L | 75_T | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2qlcA | 8 | 0.7975 | 100 | 0.204 | Contact Map | 0.845 |
| 1oi0A | 4 | 0.6962 | 83.8 | 0.91 | Contact Map | 0.376 |
| 2kcqA | 1 | 0.7152 | 82 | 0.912 | Contact Map | 0.389 |
| 3k13A | 3 | 0.9873 | 78.4 | 0.915 | Contact Map | 0.346 |
| 2kksA | 1 | 0.7532 | 71 | 0.92 | Contact Map | 0.251 |
| 3oqpA | 2 | 0.6203 | 65.4 | 0.923 | Contact Map | 0.053 |
| 2znrA | 1 | 0.8354 | 61.4 | 0.925 | Contact Map | 0.443 |
| 1jvnA | 2 | 0.9241 | 60.6 | 0.925 | Contact Map | 0.175 |
| 4h17A | 2 | 0.7152 | 50.5 | 0.93 | Contact Map | 0.057 |
| 3rzvA | 1 | 0.8734 | 49.1 | 0.93 | Contact Map | 0.389 |
Sequence Conservation (Image Generated using WebLogo v3)