| UniProt: | P76084 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13743 | ||
| Length: | 140 (129) | ||
| Sequences: | 2936 | ||
| Seq/Len: | 22.76 |
| PAAI
Paralog alert: 0.54 [within 20: 0.03] - ratio of genomes with paralogs Cluster includes: ENTH PAAI YDII YIGI |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 78_S | 107_T | 3.365 | 1.00 | |
| 27_I | 37_T | 3.163 | 1.00 | |
| 37_T | 93_T | 3.093 | 1.00 | |
| 35_V | 97_T | 2.704 | 1.00 | |
| 25_D | 37_T | 2.611 | 1.00 | |
| 36_V | 63_A | 2.505 | 1.00 | |
| 97_T | 115_V | 2.468 | 1.00 | |
| 28_S | 33_F | 2.465 | 1.00 | |
| 28_S | 35_V | 2.367 | 1.00 | |
| 30_D | 33_F | 2.139 | 1.00 | |
| 38_M | 55_Q | 2.132 | 1.00 | |
| 113_E | 121_T | 1.994 | 1.00 | |
| 33_F | 99_Q | 1.938 | 1.00 | |
| 57_F | 80_C | 1.926 | 1.00 | |
| 116_N | 120_K | 1.916 | 1.00 | |
| 60_A | 125_F | 1.901 | 1.00 | |
| 68_C | 108_G | 1.88 | 1.00 | |
| 86_R | 120_K | 1.862 | 1.00 | |
| 63_A | 96_A | 1.83 | 1.00 | |
| 33_F | 97_T | 1.756 | 1.00 | |
| 37_T | 95_T | 1.701 | 1.00 | |
| 64_F | 112_I | 1.686 | 1.00 | |
| 79_A | 83_D | 1.674 | 1.00 | |
| 35_V | 95_T | 1.672 | 1.00 | |
| 57_F | 84_F | 1.664 | 1.00 | |
| 64_F | 127_G | 1.647 | 1.00 | |
| 57_F | 82_I | 1.595 | 1.00 | |
| 99_Q | 111_D | 1.506 | 1.00 | |
| 102_H | 107_T | 1.469 | 1.00 | |
| 111_D | 124_L | 1.467 | 1.00 | |
| 99_Q | 113_E | 1.465 | 1.00 | |
| 96_A | 112_I | 1.459 | 1.00 | |
| 40_V | 51_C | 1.434 | 1.00 | |
| 60_A | 112_I | 1.412 | 1.00 | |
| 100_V | 103_Q | 1.405 | 0.99 | |
| 39_T | 93_T | 1.396 | 0.99 | |
| 56_L | 123_A | 1.395 | 0.99 | |
| 18_C | 55_Q | 1.395 | 0.99 | |
| 82_I | 123_A | 1.356 | 0.99 | |
| 60_A | 114_I | 1.344 | 0.99 | |
| 101_R | 111_D | 1.33 | 0.99 | |
| 115_V | 119_Q | 1.299 | 0.99 | |
| 21_A | 43_Q | 1.297 | 0.99 | |
| 54_G | 58_S | 1.289 | 0.99 | |
| 41_T | 44_M | 1.288 | 0.99 | |
| 88_G | 122_V | 1.281 | 0.99 | |
| 51_C | 94_L | 1.271 | 0.99 | |
| 92_D | 117_Q | 1.267 | 0.99 | |
| 27_I | 35_V | 1.184 | 0.98 | |
| 101_R | 124_L | 1.162 | 0.97 | |
| 61_D | 77_A | 1.147 | 0.97 | |
| 106_Q | 130_H | 1.136 | 0.97 | |
| 25_D | 39_T | 1.121 | 0.97 | |
| 111_D | 126_R | 1.12 | 0.96 | |
| 56_L | 114_I | 1.108 | 0.96 | |
| 113_E | 124_L | 1.104 | 0.96 | |
| 32_G | 70_S | 1.1 | 0.96 | |
| 18_C | 58_S | 1.075 | 0.95 | |
| 94_L | 114_I | 1.06 | 0.95 | |
| 86_R | 102_H | 1.059 | 0.95 | |
| 56_L | 122_V | 1.058 | 0.95 | |
| 68_C | 129_S | 1.037 | 0.94 | |
| 42_A | 45_L | 1.035 | 0.94 | |
| 88_G | 94_L | 1.032 | 0.94 | |
| 38_M | 59_L | 1.023 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3f1tA | 4 | 1 | 99.9 | 0.281 | Contact Map | 0.784 |
| 3e8pA | 4 | 0.9357 | 99.9 | 0.285 | Contact Map | 0.835 |
| 1sh8A | 2 | 0.9643 | 99.9 | 0.287 | Contact Map | 0.741 |
| 1yocA | 2 | 0.95 | 99.9 | 0.291 | Contact Map | 0.668 |
| 3e29A | 4 | 0.9786 | 99.9 | 0.296 | Contact Map | 0.839 |
| 1t82A | 4 | 0.9286 | 99.9 | 0.299 | Contact Map | 0.656 |
| 3hduA | 3 | 0.9357 | 99.9 | 0.303 | Contact Map | 0.757 |
| 3gekA | 4 | 0.8929 | 99.9 | 0.313 | Contact Map | 0.857 |
| 2fs2A | 2 | 1 | 99.9 | 0.314 | Contact Map | 0.814 |
| 3e1eA | 8 | 0.95 | 99.9 | 0.315 | Contact Map | 0.886 |
Sequence Conservation (Image Generated using WebLogo v3)