| UniProt: | P0ADP2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11467 | ||
| Length: | 155 (138) | ||
| Sequences: | 2376 | ||
| Seq/Len: | 17.22 |
| YIGI
Paralog alert: 0.62 [within 20: 0.06] - ratio of genomes with paralogs Cluster includes: ENTH PAAI YDII YIGI |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 102_I | 130_V | 3.515 | 1.00 | |
| 33_E | 43_A | 3.218 | 1.00 | |
| 43_A | 116_R | 3.038 | 1.00 | |
| 41_Q | 120_T | 2.887 | 1.00 | |
| 31_E | 43_A | 2.605 | 1.00 | |
| 34_R | 41_Q | 2.58 | 1.00 | |
| 120_T | 138_H | 2.52 | 1.00 | |
| 34_R | 39_F | 2.47 | 1.00 | |
| 42_L | 71_A | 2.456 | 1.00 | |
| 44_F | 63_V | 2.227 | 1.00 | |
| 36_E | 39_F | 2.191 | 1.00 | |
| 71_A | 119_A | 2.056 | 1.00 | |
| 139_N | 143_L | 1.988 | 1.00 | |
| 136_E | 144_Y | 1.92 | 1.00 | |
| 39_F | 122_S | 1.913 | 1.00 | |
| 76_C | 131_A | 1.851 | 1.00 | |
| 110_R | 143_L | 1.847 | 1.00 | |
| 72_A | 135_V | 1.82 | 1.00 | |
| 65_A | 104_L | 1.791 | 1.00 | |
| 65_A | 108_Y | 1.681 | 1.00 | |
| 43_A | 118_T | 1.677 | 1.00 | |
| 68_L | 148_A | 1.668 | 1.00 | |
| 112_G | 145_I | 1.615 | 1.00 | |
| 122_S | 134_R | 1.593 | 1.00 | |
| 39_F | 120_T | 1.578 | 1.00 | |
| 68_L | 135_V | 1.573 | 1.00 | |
| 38_E | 78_G | 1.537 | 1.00 | |
| 65_A | 106_V | 1.507 | 1.00 | |
| 24_F | 63_V | 1.49 | 1.00 | |
| 72_A | 150_A | 1.469 | 1.00 | |
| 8_E | 12_K | 1.431 | 1.00 | |
| 119_A | 135_V | 1.425 | 1.00 | |
| 45_K | 116_R | 1.412 | 1.00 | |
| 6_T | 9_Q | 1.403 | 0.99 | |
| 27_A | 49_M | 1.395 | 0.99 | |
| 103_D | 107_D | 1.39 | 0.99 | |
| 64_I | 146_A | 1.387 | 0.99 | |
| 122_S | 136_E | 1.367 | 0.99 | |
| 106_V | 146_A | 1.348 | 0.99 | |
| 41_Q | 118_T | 1.341 | 0.99 | |
| 125_R | 130_V | 1.33 | 0.99 | |
| 46_N | 59_L | 1.329 | 0.99 | |
| 117_F | 137_L | 1.319 | 0.99 | |
| 79_S | 126_A | 1.317 | 0.99 | |
| 134_R | 147_S | 1.311 | 0.99 | |
| 134_R | 149_T | 1.302 | 0.99 | |
| 12_K | 16_E | 1.3 | 0.99 | |
| 31_E | 45_K | 1.283 | 0.99 | |
| 47_Q | 50_M | 1.283 | 0.99 | |
| 123_L | 126_A | 1.276 | 0.99 | |
| 69_D | 101_T | 1.275 | 0.99 | |
| 109_L | 125_R | 1.232 | 0.98 | |
| 68_L | 137_L | 1.23 | 0.98 | |
| 138_H | 142_Q | 1.228 | 0.98 | |
| 62_G | 66_S | 1.218 | 0.98 | |
| 76_C | 152_Y | 1.199 | 0.98 | |
| 124_L | 147_S | 1.188 | 0.98 | |
| 33_E | 41_Q | 1.152 | 0.97 | |
| 136_E | 147_S | 1.114 | 0.96 | |
| 110_R | 125_R | 1.097 | 0.96 | |
| 129_K | 153_M | 1.091 | 0.96 | |
| 64_I | 145_I | 1.072 | 0.95 | |
| 115_E | 140_E | 1.065 | 0.95 | |
| 109_L | 144_Y | 1.063 | 0.95 | |
| 24_F | 66_S | 1.045 | 0.94 | |
| 124_L | 134_R | 1.039 | 0.94 | |
| 37_K | 79_S | 1.027 | 0.94 | |
| 109_L | 147_S | 1.016 | 0.93 | |
| 107_D | 132_V | 1.007 | 0.93 | |
| 117_F | 145_I | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3e8pA | 4 | 0.9935 | 99.9 | 0.288 | Contact Map | 0.804 |
| 3hduA | 3 | 1 | 99.9 | 0.308 | Contact Map | 0.75 |
| 3f1tA | 4 | 0.8839 | 99.9 | 0.317 | Contact Map | 0.768 |
| 1yocA | 2 | 0.8968 | 99.9 | 0.339 | Contact Map | 0.659 |
| 3lmbA | 2 | 0.9097 | 99.9 | 0.34 | Contact Map | 0.683 |
| 1sh8A | 2 | 0.8581 | 99.9 | 0.343 | Contact Map | 0.713 |
| 1t82A | 4 | 0.8645 | 99.9 | 0.356 | Contact Map | 0.625 |
| 3gekA | 4 | 0.7677 | 99.9 | 0.359 | Contact Map | 0.851 |
| 1vh5A | 2 | 0.8903 | 99.9 | 0.364 | Contact Map | 0.842 |
| 1vh9A | 2 | 0.8903 | 99.9 | 0.364 | Contact Map | 0.744 |
Sequence Conservation (Image Generated using WebLogo v3)