| UniProt: | P33014 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11894 | ||
| Length: | 75 (73) | ||
| Sequences: | 1279 | ||
| Seq/Len: | 17.52 |
| YEED
Paralog alert: 0.51 [within 20: 0.05] - ratio of genomes with paralogs Cluster includes: TUSA YEDF YEED |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 56_A | 73_Q | 3.333 | 1.00 | |
| 28_V | 31_D | 2.673 | 1.00 | |
| 3_I | 31_D | 2.383 | 1.00 | |
| 9_V | 67_A | 2.354 | 1.00 | |
| 9_V | 36_E | 2.249 | 1.00 | |
| 34_V | 69_S | 2.171 | 1.00 | |
| 5_K | 34_V | 1.952 | 1.00 | |
| 32_E | 58_T | 1.846 | 1.00 | |
| 27_M | 33_L | 1.732 | 1.00 | |
| 20_A | 46_I | 1.582 | 1.00 | |
| 61_Q | 69_S | 1.539 | 1.00 | |
| 39_C | 45_A | 1.515 | 1.00 | |
| 32_E | 71_T | 1.483 | 1.00 | |
| 50_A | 72_V | 1.463 | 1.00 | |
| 4_K | 23_A | 1.456 | 1.00 | |
| 8_V | 37_F | 1.338 | 0.99 | |
| 6_L | 33_L | 1.33 | 0.99 | |
| 35_I | 46_I | 1.33 | 0.99 | |
| 20_A | 33_L | 1.289 | 0.99 | |
| 9_V | 38_D | 1.289 | 0.99 | |
| 15_F | 19_E | 1.284 | 0.99 | |
| 11_Q | 15_F | 1.262 | 0.99 | |
| 20_A | 35_I | 1.258 | 0.99 | |
| 23_A | 26_E | 1.251 | 0.99 | |
| 36_E | 69_S | 1.228 | 0.98 | |
| 29_S | 75_A | 1.212 | 0.98 | |
| 10_T | 38_D | 1.201 | 0.98 | |
| 17_L | 49_W | 1.195 | 0.98 | |
| 5_K | 36_E | 1.142 | 0.97 | |
| 34_V | 71_T | 1.114 | 0.96 | |
| 42_A | 70_I | 1.112 | 0.96 | |
| 50_A | 57_I | 1.09 | 0.96 | |
| 11_Q | 19_E | 1.077 | 0.95 | |
| 38_D | 41_Q | 1.072 | 0.95 | |
| 32_E | 73_Q | 1.068 | 0.95 | |
| 43_T | 60_Y | 1.059 | 0.95 | |
| 27_M | 30_G | 1.055 | 0.95 | |
| 62_Q | 65_D | 1.041 | 0.94 | |
| 21_K | 25_A | 1.03 | 0.94 | |
| 24_L | 49_W | 1.026 | 0.94 | |
| 18_I | 49_W | 1.026 | 0.94 | |
| 15_F | 18_I | 1.012 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1jdqA | 1 | 1 | 99.8 | 0.096 | Contact Map | 0.387 |
| 1je3A | 1 | 0.9733 | 99.8 | 0.12 | Contact Map | 0.406 |
| 3hz7A | 1 | 0.96 | 99.8 | 0.133 | Contact Map | 0.728 |
| 3lvjC | 2 | 0.9867 | 99.8 | 0.136 | Contact Map | 0.82 |
| 1pavA | 1 | 0.9867 | 99.8 | 0.145 | Contact Map | 0.636 |
| 2lxrA | 1 | 0.9333 | 99.7 | 0.215 | Contact Map | 0.43 |
| 1okgA | 1 | 0.72 | 98.1 | 0.593 | Contact Map | 0.177 |
| 2qifA | 2 | 0.7867 | 47.6 | 0.838 | Contact Map | 0.346 |
| 2l3mA | 1 | 0.7733 | 47 | 0.839 | Contact Map | 0.172 |
| 1yg0A | 1 | 0.76 | 45.7 | 0.84 | Contact Map | 0.18 |
Sequence Conservation (Image Generated using WebLogo v3)