| UniProt: | P0A890 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12216 | ||
| Length: | 81 (74) | ||
| Sequences: | 1302 | ||
| Seq/Len: | 17.59 |
| TUSA
Paralog alert: 0.51 [within 20: 0.05] - ratio of genomes with paralogs Cluster includes: TUSA YEDF YEED |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 62_E | 78_R | 3.255 | 1.00 | |
| 34_Q | 37_E | 2.712 | 1.00 | |
| 9_D | 37_E | 2.634 | 1.00 | |
| 15_L | 72_P | 2.395 | 1.00 | |
| 40_L | 74_R | 2.202 | 1.00 | |
| 15_L | 42_I | 2.135 | 1.00 | |
| 11_T | 40_L | 1.989 | 1.00 | |
| 38_T | 64_V | 1.867 | 1.00 | |
| 33_M | 39_L | 1.753 | 1.00 | |
| 26_V | 52_I | 1.637 | 1.00 | |
| 45_D | 51_D | 1.562 | 1.00 | |
| 56_C | 77_I | 1.547 | 1.00 | |
| 12_L | 39_L | 1.433 | 1.00 | |
| 67_E | 74_R | 1.425 | 1.00 | |
| 15_L | 44_D | 1.415 | 1.00 | |
| 14_A | 43_A | 1.399 | 0.99 | |
| 38_T | 76_L | 1.394 | 0.99 | |
| 68_T | 71_L | 1.363 | 0.99 | |
| 26_V | 39_L | 1.336 | 0.99 | |
| 10_H | 29_T | 1.321 | 0.99 | |
| 41_I | 52_I | 1.318 | 0.99 | |
| 42_I | 74_R | 1.318 | 0.99 | |
| 17_L | 21_E | 1.316 | 0.99 | |
| 26_V | 41_I | 1.293 | 0.99 | |
| 21_E | 25_M | 1.291 | 0.99 | |
| 16_G | 44_D | 1.288 | 0.99 | |
| 35_P | 80_G | 1.262 | 0.99 | |
| 23_V | 55_F | 1.243 | 0.98 | |
| 29_T | 32_N | 1.217 | 0.98 | |
| 56_C | 63_L | 1.205 | 0.98 | |
| 38_T | 78_R | 1.185 | 0.98 | |
| 27_R | 31_R | 1.123 | 0.97 | |
| 44_D | 47_A | 1.096 | 0.96 | |
| 40_L | 76_L | 1.095 | 0.96 | |
| 49_T | 66_K | 1.09 | 0.96 | |
| 48_T | 75_Y | 1.072 | 0.95 | |
| 17_L | 25_M | 1.05 | 0.94 | |
| 24_M | 27_R | 1.047 | 0.94 | |
| 21_E | 24_M | 1.01 | 0.93 | |
| 47_A | 54_G | 1.01 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3lvjC | 2 | 1 | 99.8 | 0.13 | Contact Map | 0.831 |
| 1je3A | 1 | 0.9506 | 99.8 | 0.131 | Contact Map | 0.4 |
| 1jdqA | 1 | 0.963 | 99.8 | 0.138 | Contact Map | 0.418 |
| 3hz7A | 1 | 0.9012 | 99.8 | 0.161 | Contact Map | 0.705 |
| 1pavA | 1 | 0.963 | 99.8 | 0.17 | Contact Map | 0.632 |
| 2lxrA | 1 | 0.8642 | 99.7 | 0.27 | Contact Map | 0.449 |
| 1okgA | 1 | 0.7407 | 98 | 0.629 | Contact Map | 0.216 |
| 1yjrA | 1 | 0.8025 | 53.7 | 0.843 | Contact Map | 0.286 |
| 1cc8A | 1 | 0.8025 | 53 | 0.843 | Contact Map | 0.285 |
| 2l3mA | 1 | 0.7531 | 47.3 | 0.849 | Contact Map | 0.23 |
Sequence Conservation (Image Generated using WebLogo v3)