| UniProt: | P0AA31 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11661 | ||
| Length: | 77 (72) | ||
| Sequences: | 1294 | ||
| Seq/Len: | 17.97 |
| YEDF
Paralog alert: 0.51 [within 20: 0.05] - ratio of genomes with paralogs Cluster includes: TUSA YEDF YEED |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 60_T | 76_Q | 3.35 | 1.00 | |
| 32_K | 35_E | 2.619 | 1.00 | |
| 7_D | 35_E | 2.606 | 1.00 | |
| 13_V | 70_T | 2.433 | 1.00 | |
| 38_E | 72_R | 2.197 | 1.00 | |
| 13_V | 40_V | 2.077 | 1.00 | |
| 9_R | 38_E | 1.99 | 1.00 | |
| 36_I | 62_L | 1.787 | 1.00 | |
| 31_L | 37_L | 1.765 | 1.00 | |
| 24_T | 50_I | 1.603 | 1.00 | |
| 43_C | 49_N | 1.582 | 1.00 | |
| 54_A | 75_I | 1.541 | 1.00 | |
| 36_I | 74_L | 1.469 | 1.00 | |
| 8_Y | 27_A | 1.432 | 1.00 | |
| 65_Q | 72_R | 1.415 | 1.00 | |
| 12_M | 41_S | 1.374 | 0.99 | |
| 13_V | 42_D | 1.356 | 0.99 | |
| 15_E | 19_Y | 1.328 | 0.99 | |
| 66_Q | 69_P | 1.327 | 0.99 | |
| 10_L | 37_L | 1.318 | 0.99 | |
| 39_V | 50_I | 1.314 | 0.99 | |
| 24_T | 37_L | 1.307 | 0.99 | |
| 24_T | 39_V | 1.293 | 0.99 | |
| 19_Y | 23_A | 1.278 | 0.99 | |
| 14_G | 42_D | 1.274 | 0.99 | |
| 40_V | 72_R | 1.251 | 0.99 | |
| 27_A | 30_Q | 1.223 | 0.98 | |
| 21_A | 53_D | 1.171 | 0.98 | |
| 47_I | 64_I | 1.126 | 0.97 | |
| 54_A | 61_V | 1.119 | 0.96 | |
| 25_L | 29_P | 1.118 | 0.96 | |
| 46_S | 73_Y | 1.114 | 0.96 | |
| 36_I | 76_Q | 1.091 | 0.96 | |
| 38_E | 74_L | 1.07 | 0.95 | |
| 42_D | 45_Q | 1.06 | 0.95 | |
| 15_E | 23_A | 1.05 | 0.94 | |
| 9_R | 40_V | 1.041 | 0.94 | |
| 22_V | 53_D | 1.025 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1je3A | 1 | 1 | 99.9 | 0.075 | Contact Map | 0.408 |
| 1jdqA | 1 | 1 | 99.8 | 0.085 | Contact Map | 0.401 |
| 1pavA | 1 | 0.987 | 99.8 | 0.12 | Contact Map | 0.641 |
| 3lvjC | 2 | 0.974 | 99.8 | 0.137 | Contact Map | 0.839 |
| 3hz7A | 1 | 0.9221 | 99.8 | 0.139 | Contact Map | 0.71 |
| 2lxrA | 1 | 0.8831 | 99.7 | 0.244 | Contact Map | 0.447 |
| 1okgA | 1 | 0.7403 | 98 | 0.609 | Contact Map | 0.19 |
| 2l3mA | 1 | 0.7922 | 62.3 | 0.827 | Contact Map | 0.173 |
| 2qifA | 2 | 0.7662 | 51.4 | 0.838 | Contact Map | 0.275 |
| 1yg0A | 1 | 0.7403 | 51.2 | 0.838 | Contact Map | 0.156 |
Sequence Conservation (Image Generated using WebLogo v3)