| UniProt: | P0C8J6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12419 | ||
| Length: | 284 (284) | ||
| Sequences: | 1911 | ||
| Seq/Len: | 6.73 |
| GATY
Paralog alert: 0.36 [within 20: 0.04] - ratio of genomes with paralogs Cluster includes: ALF GATY KBAY YDJI |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 162_E | 166_A | 3.908 | 1.00 | |
| 40_N | 268_R | 3.874 | 1.00 | |
| 110_F | 162_E | 3.35 | 1.00 | |
| 43_A | 280_C | 3.331 | 1.00 | |
| 119_E | 122_D | 3.307 | 1.00 | |
| 40_N | 272_S | 3.277 | 1.00 | |
| 245_N | 249_E | 2.968 | 1.00 | |
| 12_N | 16_G | 2.749 | 1.00 | |
| 91_A | 123_F | 2.661 | 1.00 | |
| 12_N | 18_Y | 2.64 | 1.00 | |
| 161_R | 165_E | 2.634 | 1.00 | |
| 36_E | 268_R | 2.625 | 1.00 | |
| 195_E | 199_Q | 2.609 | 1.00 | |
| 190_D | 193_R | 2.604 | 1.00 | |
| 41_L | 276_A | 2.603 | 1.00 | |
| 34_V | 45_V | 2.515 | 1.00 | |
| 109_P | 112_Q | 2.496 | 1.00 | |
| 115_S | 119_E | 2.379 | 1.00 | |
| 95_R | 123_F | 2.324 | 1.00 | |
| 39_A | 74_H | 2.311 | 1.00 | |
| 215_T | 277_D | 2.244 | 1.00 | |
| 176_I | 194_L | 2.202 | 1.00 | |
| 91_A | 95_R | 2.144 | 1.00 | |
| 265_S | 269_D | 2.091 | 1.00 | |
| 276_A | 281_E | 2.084 | 1.00 | |
| 214_S | 217_D | 2.05 | 1.00 | |
| 49_G | 98_V | 2.05 | 1.00 | |
| 110_F | 114_I | 2.002 | 1.00 | |
| 103_I | 116_R | 1.976 | 1.00 | |
| 118_K | 122_D | 1.952 | 1.00 | |
| 262_S | 265_S | 1.945 | 1.00 | |
| 195_E | 220_Q | 1.913 | 1.00 | |
| 41_L | 281_E | 1.906 | 1.00 | |
| 242_A | 266_A | 1.877 | 1.00 | |
| 196_N | 199_Q | 1.846 | 1.00 | |
| 95_R | 127_F | 1.838 | 1.00 | |
| 94_V | 129_V | 1.837 | 1.00 | |
| 11_N | 15_R | 1.822 | 1.00 | |
| 268_R | 272_S | 1.819 | 1.00 | |
| 161_R | 200_W | 1.817 | 1.00 | |
| 7_K | 11_N | 1.815 | 1.00 | |
| 125_H | 170_D | 1.767 | 1.00 | |
| 195_E | 224_L | 1.756 | 1.00 | |
| 122_D | 126_R | 1.753 | 1.00 | |
| 41_L | 272_S | 1.744 | 1.00 | |
| 64_A | 68_A | 1.711 | 1.00 | |
| 191_F | 220_Q | 1.686 | 1.00 | |
| 9_M | 78_A | 1.684 | 1.00 | |
| 6_T | 171_S | 1.643 | 1.00 | |
| 105_A | 108_L | 1.643 | 1.00 | |
| 118_K | 166_A | 1.642 | 1.00 | |
| 111_A | 166_A | 1.64 | 1.00 | |
| 220_Q | 223_K | 1.639 | 1.00 | |
| 6_T | 78_A | 1.636 | 1.00 | |
| 64_A | 67_S | 1.625 | 1.00 | |
| 205_L | 226_I | 1.62 | 1.00 | |
| 22_A | 48_A | 1.591 | 1.00 | |
| 159_Q | 162_E | 1.571 | 1.00 | |
| 220_Q | 224_L | 1.527 | 0.99 | |
| 269_D | 272_S | 1.518 | 0.99 | |
| 32_Q | 264_K | 1.508 | 0.99 | |
| 243_L | 259_Y | 1.503 | 0.99 | |
| 125_H | 128_D | 1.479 | 0.99 | |
| 14_Q | 198_R | 1.472 | 0.99 | |
| 215_T | 219_Q | 1.468 | 0.99 | |
| 66_V | 79_I | 1.465 | 0.99 | |
| 275_I | 281_E | 1.462 | 0.99 | |
| 241_Q | 245_N | 1.451 | 0.99 | |
| 110_F | 159_Q | 1.441 | 0.99 | |
| 156_N | 159_Q | 1.411 | 0.99 | |
| 110_F | 166_A | 1.398 | 0.99 | |
| 25_I | 47_I | 1.389 | 0.99 | |
| 3_V | 99_R | 1.385 | 0.98 | |
| 242_A | 245_N | 1.368 | 0.98 | |
| 123_F | 127_F | 1.365 | 0.98 | |
| 266_A | 269_D | 1.364 | 0.98 | |
| 16_G | 283_R | 1.357 | 0.98 | |
| 35_V | 77_L | 1.355 | 0.98 | |
| 14_Q | 227_C | 1.348 | 0.98 | |
| 35_V | 73_Y | 1.342 | 0.98 | |
| 253_A | 258_D | 1.327 | 0.98 | |
| 45_V | 77_L | 1.322 | 0.98 | |
| 121_V | 131_V | 1.315 | 0.98 | |
| 39_A | 42_H | 1.3 | 0.97 | |
| 108_L | 112_Q | 1.288 | 0.97 | |
| 120_V | 131_V | 1.27 | 0.97 | |
| 273_K | 277_D | 1.269 | 0.97 | |
| 158_A | 200_W | 1.257 | 0.97 | |
| 31_M | 69_M | 1.25 | 0.97 | |
| 68_A | 71_K | 1.242 | 0.96 | |
| 117_V | 133_A | 1.225 | 0.96 | |
| 223_K | 279_G | 1.224 | 0.96 | |
| 51_P | 89_D | 1.22 | 0.96 | |
| 246_Y | 250_H | 1.206 | 0.96 | |
| 178_T | 213_L | 1.206 | 0.96 | |
| 17_G | 223_K | 1.2 | 0.95 | |
| 269_D | 273_K | 1.196 | 0.95 | |
| 191_F | 224_L | 1.192 | 0.95 | |
| 8_Q | 12_N | 1.191 | 0.95 | |
| 39_A | 73_Y | 1.187 | 0.95 | |
| 21_P | 271_V | 1.174 | 0.95 | |
| 215_T | 273_K | 1.172 | 0.95 | |
| 25_I | 31_M | 1.17 | 0.95 | |
| 111_A | 162_E | 1.15 | 0.94 | |
| 222_I | 278_C | 1.142 | 0.94 | |
| 192_S | 196_N | 1.141 | 0.94 | |
| 80_H | 100_S | 1.125 | 0.93 | |
| 108_L | 116_R | 1.122 | 0.93 | |
| 36_E | 264_K | 1.122 | 0.93 | |
| 272_S | 276_A | 1.114 | 0.92 | |
| 31_M | 47_I | 1.112 | 0.92 | |
| 232_A | 236_K | 1.107 | 0.92 | |
| 112_Q | 115_S | 1.103 | 0.92 | |
| 26_H | 30_T | 1.095 | 0.92 | |
| 91_A | 127_F | 1.093 | 0.92 | |
| 235_L | 267_M | 1.072 | 0.90 | |
| 193_R | 196_N | 1.055 | 0.89 | |
| 111_A | 115_S | 1.053 | 0.89 | |
| 140_G | 143_D | 1.049 | 0.89 | |
| 270_V | 273_K | 1.049 | 0.89 | |
| 147_V | 152_A | 1.043 | 0.89 | |
| 116_R | 119_E | 1.042 | 0.89 | |
| 25_I | 34_V | 1.04 | 0.89 | |
| 87_F | 119_E | 1.034 | 0.88 | |
| 21_P | 267_M | 1.031 | 0.88 | |
| 37_T | 41_L | 1.008 | 0.86 | |
| 101_V | 124_C | 1.008 | 0.86 | |
| 219_Q | 277_D | 1.008 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1gvfA | 2 | 1 | 100 | 0.046 | Contact Map | 0.742 |
| 3q94A | 2 | 0.993 | 100 | 0.052 | Contact Map | 0.806 |
| 3n9rA | 8 | 0.9965 | 100 | 0.054 | Contact Map | 0.784 |
| 1rvgA | 4 | 0.993 | 100 | 0.056 | Contact Map | 0.823 |
| 2iswA | 2 | 0.9894 | 100 | 0.06 | Contact Map | 0.774 |
| 3elfA | 1 | 1 | 100 | 0.104 | Contact Map | 0.619 |
| 3pm6A | 2 | 0.9789 | 100 | 0.116 | Contact Map | 0.773 |
| 3qm3A | 8 | 1 | 100 | 0.119 | Contact Map | 0.73 |
| 1dosA | 2 | 1 | 100 | 0.12 | Contact Map | 0.73 |
| 3txvA | 1 | 0.9648 | 100 | 0.252 | Contact Map | 0.319 |
Sequence Conservation (Image Generated using WebLogo v3)