| UniProt: | P0ADI7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12378 | ||
| Length: | 188 (186) | ||
| Sequences: | 5290 | ||
| Seq/Len: | 28.44 |
| YECD
Paralog alert: 0.71 [within 20: 0.07] - ratio of genomes with paralogs Cluster includes: PNCA RUTB YCAC YECD |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 113_E | 117_R | 3.38 | 1.00 | |
| 113_E | 147_F | 3.191 | 1.00 | |
| 123_T | 148_N | 3.183 | 1.00 | |
| 105_G | 141_N | 3.165 | 1.00 | |
| 55_R | 100_I | 2.952 | 1.00 | |
| 40_L | 152_A | 2.681 | 1.00 | |
| 126_L | 139_A | 2.679 | 1.00 | |
| 44_F | 49_Q | 2.538 | 1.00 | |
| 16_L | 37_A | 2.482 | 1.00 | |
| 8_T | 122_D | 2.371 | 1.00 | |
| 37_A | 127_C | 2.339 | 1.00 | |
| 152_A | 184_I | 2.237 | 1.00 | |
| 123_T | 150_V | 2.233 | 1.00 | |
| 124_I | 142_A | 2.065 | 1.00 | |
| 113_E | 145_L | 2.054 | 1.00 | |
| 10_A | 121_I | 2.016 | 1.00 | |
| 106_A | 138_T | 1.977 | 1.00 | |
| 171_I | 176_A | 1.974 | 1.00 | |
| 180_S | 183_E | 1.901 | 1.00 | |
| 9_T | 123_T | 1.901 | 1.00 | |
| 29_T | 32_E | 1.891 | 1.00 | |
| 161_A | 165_N | 1.863 | 1.00 | |
| 36_R | 39_K | 1.831 | 1.00 | |
| 136_E | 140_R | 1.797 | 1.00 | |
| 13_V | 41_A | 1.781 | 1.00 | |
| 131_T | 164_H | 1.765 | 1.00 | |
| 153_E | 178_V | 1.761 | 1.00 | |
| 44_F | 125_V | 1.759 | 1.00 | |
| 99_I | 115_Q | 1.748 | 1.00 | |
| 36_R | 155_A | 1.728 | 1.00 | |
| 111_D | 115_Q | 1.694 | 1.00 | |
| 131_T | 156_C | 1.683 | 1.00 | |
| 142_A | 149_L | 1.663 | 1.00 | |
| 126_L | 138_T | 1.656 | 1.00 | |
| 52_F | 115_Q | 1.633 | 1.00 | |
| 39_K | 182_E | 1.598 | 1.00 | |
| 169_N | 172_Y | 1.572 | 1.00 | |
| 43_K | 185_L | 1.561 | 1.00 | |
| 154_D | 181_V | 1.556 | 1.00 | |
| 43_K | 47_S | 1.548 | 1.00 | |
| 45_R | 96_D | 1.539 | 1.00 | |
| 36_R | 181_V | 1.508 | 1.00 | |
| 21_L | 87_P | 1.504 | 1.00 | |
| 132_N | 158_A | 1.487 | 1.00 | |
| 38_G | 89_A | 1.484 | 1.00 | |
| 9_T | 125_V | 1.468 | 1.00 | |
| 13_V | 127_C | 1.446 | 1.00 | |
| 67_K | 76_A | 1.44 | 1.00 | |
| 153_E | 180_S | 1.43 | 1.00 | |
| 125_V | 152_A | 1.425 | 1.00 | |
| 12_V | 126_L | 1.413 | 1.00 | |
| 38_G | 42_A | 1.413 | 1.00 | |
| 153_E | 168_I | 1.399 | 0.99 | |
| 117_R | 147_F | 1.399 | 0.99 | |
| 19_G | 84_W | 1.376 | 0.99 | |
| 13_V | 37_A | 1.369 | 0.99 | |
| 11_L | 44_F | 1.355 | 0.99 | |
| 131_T | 168_I | 1.344 | 0.99 | |
| 18_E | 88_A | 1.329 | 0.99 | |
| 165_N | 169_N | 1.316 | 0.99 | |
| 155_A | 181_V | 1.315 | 0.99 | |
| 97_I | 115_Q | 1.308 | 0.99 | |
| 36_R | 154_D | 1.3 | 0.99 | |
| 107_F | 142_A | 1.288 | 0.99 | |
| 115_Q | 119_R | 1.275 | 0.99 | |
| 135_V | 151_I | 1.274 | 0.99 | |
| 114_L | 118_R | 1.256 | 0.99 | |
| 136_E | 170_H | 1.236 | 0.98 | |
| 50_P | 119_R | 1.229 | 0.98 | |
| 136_E | 167_S | 1.225 | 0.98 | |
| 139_A | 171_I | 1.203 | 0.98 | |
| 33_V | 37_A | 1.18 | 0.98 | |
| 158_A | 164_H | 1.175 | 0.98 | |
| 152_A | 155_A | 1.156 | 0.97 | |
| 54_V | 106_A | 1.155 | 0.97 | |
| 14_I | 134_G | 1.147 | 0.97 | |
| 35_N | 89_A | 1.126 | 0.97 | |
| 151_I | 156_C | 1.126 | 0.97 | |
| 111_D | 114_L | 1.115 | 0.96 | |
| 156_C | 164_H | 1.107 | 0.96 | |
| 139_A | 176_A | 1.098 | 0.96 | |
| 143_W | 176_A | 1.097 | 0.96 | |
| 18_E | 85_Q | 1.091 | 0.96 | |
| 41_A | 53_L | 1.056 | 0.95 | |
| 162_E | 165_N | 1.05 | 0.94 | |
| 15_D | 101_K | 1.046 | 0.94 | |
| 34_V | 87_P | 1.044 | 0.94 | |
| 137_S | 140_R | 1.022 | 0.93 | |
| 10_A | 52_F | 1.02 | 0.93 | |
| 150_V | 179_R | 1.017 | 0.93 | |
| 42_A | 46_A | 1.009 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1j2rA | 4 | 1 | 100 | 0.102 | Contact Map | 0.85 |
| 3txyA | 1 | 0.9947 | 100 | 0.112 | Contact Map | 0.794 |
| 3hb7A | 8 | 0.9574 | 100 | 0.121 | Contact Map | 0.889 |
| 3irvA | 1 | 1 | 100 | 0.13 | Contact Map | 0.849 |
| 2fq1A | 2 | 0.9894 | 100 | 0.134 | Contact Map | 0.846 |
| 3kl2A | 12 | 1 | 100 | 0.137 | Contact Map | 0.847 |
| 3ot4A | 8 | 1 | 100 | 0.142 | Contact Map | 0.87 |
| 3hu5A | 2 | 1 | 100 | 0.142 | Contact Map | 0.845 |
| 1nbaA | 4 | 1 | 100 | 0.147 | Contact Map | 0.9 |
| 1nf9A | 1 | 0.9734 | 100 | 0.151 | Contact Map | 0.8 |
Sequence Conservation (Image Generated using WebLogo v3)