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OPENSEQ.org

YAGQ - YAGS
UniProt: P77183 - P77324
Length: 636
Sequences: 362
Seq/Len: 0.64
I_Prob: 0.00

YAGQ - Uncharacterized protein YagQ
Paralog alert: 0.19 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YAGQ
YAGS - Putative xanthine dehydrogenase YagS FAD-binding subunit
Paralog alert: 0.61 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: XDHB YAGS YGFM
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
193_A 29_A 1.28 0.00
180_L 53_G 1.27 0.00
44_V 49_I 1.27 0.00
43_L 270_A 1.13 0.00
59_A 77_D 1.12 0.00
49_I 256_V 1.12 0.00
269_W 109_T 1.11 0.00
295_L 47_H 1.09 0.00
57_L 299_K 1.08 0.00
160_Q 11_T 1.06 0.00
100_Y 207_L 1.04 0.00
40_G 189_T 1.04 0.00
244_K 304_K 1.04 0.00
219_T 248_I 1.03 0.00
57_L 173_D 1.03 0.00
131_L 297_T 1.02 0.00
46_L 57_D 1.01 0.00
237_L 50_D 0.99 0.00
116_G 99_A 0.99 0.00
77_C 50_D 0.99 0.00
296_S 191_A 0.98 0.00
174_F 59_I 0.96 0.00
111_L 159_A 0.95 0.00
297_V 48_L 0.94 0.00
59_A 218_L 0.94 0.00
182_I 95_L 0.94 0.00
258_T 168_A 0.94 0.00
46_L 280_Q 0.93 0.00
26_T 189_T 0.92 0.00
297_V 192_D 0.91 0.00
92_S 49_I 0.91 0.00
228_H 107_A 0.91 0.00
43_L 69_I 0.90 0.00
28_L 29_A 0.90 0.00
43_L 261_V 0.90 0.00
301_V 174_A 0.90 0.00
93_G 210_G 0.90 0.00
42_V 99_A 0.90 0.00
125_R 175_V 0.89 0.00
62_V 67_L 0.89 0.00
80_A 103_L 0.89 0.00
77_C 15_A 0.89 0.00
52_G 272_D 0.88 0.00
185_R 299_K 0.88 0.00
125_R 245_A 0.88 0.00
90_M 248_I 0.88 0.00
133_V 188_I 0.87 0.00
270_S 276_S 0.87 0.00
228_H 75_N 0.87 0.00
296_S 51_V 0.87 0.00
62_V 207_L 0.87 0.00
261_L 11_T 0.86 0.00
233_E 89_A 0.86 0.00
203_S 225_K 0.86 0.00
91_G 173_D 0.85 0.00
246_F 173_D 0.85 0.00
266_E 218_L 0.85 0.00
43_L 193_F 0.85 0.00
300_E 221_P 0.85 0.00
285_P 286_L 0.85 0.00
59_A 16_A 0.84 0.00
254_Y 77_D 0.84 0.00
28_L 60_E 0.84 0.00
267_L 217_T 0.84 0.00
59_A 17_L 0.83 0.00
30_F 195_H 0.83 0.00
301_V 59_I 0.83 0.00
132_A 282_V 0.83 0.00
272_E 54_L 0.83 0.00
181_M 103_L 0.83 0.00
108_D 49_I 0.82 0.00
271_R 99_A 0.82 0.00
304_V 282_V 0.82 0.00
53_A 227_I 0.82 0.00
96_R 69_I 0.82 0.00
126_S 217_T 0.81 0.00
45_T 4_F 0.81 0.00
137_L 59_I 0.81 0.00
128_Q 192_D 0.81 0.00
295_L 39_K 0.81 0.00
201_Y 311_L 0.81 0.00
36_M 251_D 0.81 0.00
237_L 183_G 0.81 0.00
137_L 188_I 0.81 0.00
91_G 284_D 0.80 0.00
90_M 67_L 0.80 0.00
63_V 171_L 0.80 0.00
180_L 285_T 0.80 0.00
247_Y 107_A 0.80 0.00
77_C 237_Y 0.80 0.00
67_G 65_G 0.80 0.00
133_V 48_L 0.79 0.00
278_R 74_R 0.79 0.00
210_P 24_G 0.79 0.00
301_V 54_L 0.79 0.00
119_L 96_L 0.79 0.00
26_T 192_D 0.79 0.00
298_L 12_P 0.79 0.00
43_L 250_P 0.79 0.00
119_L 303_A 0.79 0.00
289_D 31_G 0.79 0.00
57_L 99_A 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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