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OPENSEQ.org

PAAC - YFAE
UniProt: P76079 - P0ABW3
Length: 332
Sequences: 231
Seq/Len: 0.70
I_Prob: 0.07

PAAC - 1,2-phenylacetyl-CoA epoxidase, subunit C
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PAAA PAAC
YFAE - Uncharacterized ferredoxin-like protein YfaE
Paralog alert: 0.79 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YFAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_E 39_E 1.75 0.07
41_I 36_Q 1.61 0.05
83_V 78_G 1.50 0.03
155_M 4_V 1.32 0.02
111_L 41_Y 1.26 0.02
135_R 30_N 1.25 0.02
236_M 54_V 1.15 0.01
17_V 4_V 1.15 0.01
35_D 27_E 1.09 0.01
176_D 33_V 1.05 0.01
103_W 62_A 1.04 0.01
169_L 33_V 1.04 0.01
194_A 35_Y 1.03 0.01
57_A 46_R 1.01 0.01
64_D 66_P 1.01 0.01
103_W 58_A 1.01 0.01
35_D 26_L 1.00 0.01
195_W 35_Y 0.99 0.01
226_T 6_L 0.99 0.01
228_H 78_G 0.99 0.01
196_E 82_I 0.98 0.01
108_F 62_A 0.97 0.01
119_L 28_S 0.97 0.01
96_R 32_A 0.96 0.01
192_R 74_C 0.95 0.01
203_I 49_L 0.95 0.01
89_N 63_F 0.94 0.01
189_R 24_A 0.94 0.01
58_E 49_L 0.93 0.01
210_V 47_T 0.93 0.01
81_L 43_G 0.93 0.01
50_R 33_V 0.92 0.01
199_V 74_C 0.92 0.01
229_L 25_A 0.91 0.01
91_A 26_L 0.91 0.01
135_R 33_V 0.91 0.01
121_A 36_Q 0.90 0.01
139_G 15_C 0.90 0.01
219_G 25_A 0.90 0.01
113_E 79_D 0.90 0.01
101_D 47_T 0.90 0.01
39_A 24_A 0.89 0.01
186_V 74_C 0.88 0.01
16_L 36_Q 0.88 0.01
53_L 21_S 0.88 0.01
201_A 35_Y 0.87 0.01
199_V 35_Y 0.87 0.01
79_N 38_R 0.87 0.01
126_A 33_V 0.86 0.00
57_A 15_C 0.86 0.00
139_G 66_P 0.85 0.00
8_T 39_E 0.85 0.00
93_T 81_E 0.84 0.00
19_S 43_G 0.84 0.00
95_A 33_V 0.84 0.00
226_T 4_V 0.84 0.00
196_E 49_L 0.84 0.00
9_L 60_P 0.84 0.00
207_T 51_A 0.83 0.00
57_A 26_L 0.83 0.00
231_P 74_C 0.83 0.00
91_A 63_F 0.82 0.00
205_E 35_Y 0.82 0.00
164_R 82_I 0.82 0.00
114_S 51_A 0.82 0.00
82_L 21_S 0.81 0.00
55_Y 35_Y 0.81 0.00
113_E 78_G 0.80 0.00
171_D 49_L 0.80 0.00
79_N 24_A 0.79 0.00
210_V 68_E 0.79 0.00
136_F 75_R 0.79 0.00
154_K 50_V 0.78 0.00
73_D 61_L 0.78 0.00
216_Y 26_L 0.78 0.00
226_T 12_Q 0.78 0.00
51_N 71_P 0.78 0.00
247_Q 51_A 0.77 0.00
170_F 39_E 0.77 0.00
150_V 53_Q 0.77 0.00
94_I 10_G 0.77 0.00
157_Q 49_L 0.77 0.00
104_H 62_A 0.77 0.00
157_Q 68_E 0.77 0.00
221_K 50_V 0.77 0.00
90_F 22_L 0.77 0.00
65_E 62_A 0.76 0.00
91_A 50_V 0.76 0.00
77_F 22_L 0.76 0.00
52_F 62_A 0.76 0.00
191_L 74_C 0.76 0.00
136_F 43_G 0.76 0.00
53_L 54_V 0.75 0.00
20_Q 29_H 0.75 0.00
175_I 77_K 0.75 0.00
212_Q 35_Y 0.75 0.00
135_R 71_P 0.75 0.00
24_E 64_I 0.75 0.00
50_R 30_N 0.75 0.00
96_R 46_R 0.74 0.00
53_L 29_H 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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