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OPENSEQ.org

FLGD - FLGE
UniProt: P75936 - P75937
Length: 633
Sequences: 388
Seq/Len: 0.64
I_Prob: 0.04

FLGD - Basal-body rod modification protein FlgD
Paralog alert: 0.14 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLGD
FLGE - Flagellar hook protein FlgE
Paralog alert: 0.21 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FLGE FLGF FLGG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
139_I 103_D 1.75 0.04
39_L 395_L 1.72 0.04
34_S 303_Y 1.68 0.03
40_V 21_G 1.62 0.03
68_S 386_Q 1.37 0.01
69_G 371_L 1.31 0.01
64_I 5_Q 1.29 0.01
137_A 350_G 1.29 0.01
104_G 5_Q 1.25 0.01
67_V 273_N 1.24 0.01
59_S 200_F 1.19 0.01
202_V 388_I 1.18 0.01
41_A 210_V 1.17 0.01
47_D 379_R 1.16 0.01
164_W 375_I 1.16 0.01
96_I 71_R 1.16 0.01
181_V 6_A 1.16 0.01
58_T 5_Q 1.16 0.01
220_G 333_W 1.14 0.01
56_E 304_S 1.14 0.01
203_Q 186_V 1.14 0.01
44_K 284_K 1.14 0.01
41_A 20_I 1.13 0.01
164_W 402_R 1.12 0.01
50_N 150_T 1.11 0.01
202_V 208_W 1.11 0.01
49_T 352_F 1.10 0.01
69_G 3_F 1.09 0.01
67_V 366_D 1.09 0.01
40_V 387_T 1.09 0.01
67_V 344_L 1.09 0.01
216_L 34_S 1.09 0.01
28_A 186_V 1.09 0.01
70_I 371_L 1.07 0.01
54_N 13_A 1.07 0.01
61_L 388_I 1.06 0.01
96_I 333_W 1.06 0.01
80_I 28_A 1.06 0.01
147_V 281_N 1.05 0.01
43_L 63_D 1.04 0.01
64_I 16_N 1.04 0.01
189_G 385_A 1.04 0.01
147_V 200_F 1.03 0.01
143_N 78_S 1.02 0.01
185_A 381_Y 1.01 0.01
96_I 350_G 1.01 0.01
41_A 55_A 1.01 0.01
70_I 382_Q 1.00 0.01
57_L 36_T 1.00 0.01
166_G 375_I 1.00 0.01
128_L 157_N 1.00 0.01
166_G 13_A 1.00 0.01
177_G 190_Q 0.99 0.00
44_K 370_E 0.99 0.00
61_L 368_S 0.99 0.00
154_E 304_S 0.99 0.00
37_T 231_N 0.99 0.00
59_S 94_Y 0.98 0.00
209_N 178_Y 0.97 0.00
49_T 42_M 0.97 0.00
140_T 229_E 0.97 0.00
83_Q 385_A 0.97 0.00
32_Q 288_L 0.97 0.00
102_I 318_N 0.97 0.00
64_I 50_L 0.97 0.00
88_Q 52_V 0.97 0.00
77_L 36_T 0.96 0.00
94_N 231_N 0.96 0.00
62_A 372_V 0.96 0.00
81_S 140_P 0.96 0.00
214_L 397_T 0.95 0.00
96_I 59_Q 0.95 0.00
94_N 394_I 0.95 0.00
88_Q 59_Q 0.95 0.00
126_V 149_T 0.95 0.00
133_D 97_N 0.95 0.00
95_L 312_G 0.95 0.00
96_I 150_T 0.94 0.00
80_I 112_Q 0.94 0.00
194_A 331_N 0.94 0.00
66_T 117_T 0.94 0.00
87_S 375_I 0.94 0.00
50_N 388_I 0.94 0.00
86_N 139_I 0.94 0.00
43_L 375_I 0.93 0.00
66_T 386_Q 0.93 0.00
40_V 144_M 0.93 0.00
214_L 37_A 0.93 0.00
69_G 386_Q 0.93 0.00
215_D 43_F 0.92 0.00
227_V 103_D 0.92 0.00
145_A 336_T 0.92 0.00
148_R 78_S 0.92 0.00
69_G 13_A 0.92 0.00
73_L 382_Q 0.92 0.00
182_A 30_Y 0.92 0.00
102_I 358_G 0.92 0.00
54_N 329_G 0.92 0.00
36_L 141_N 0.92 0.00
157_A 296_D 0.91 0.00
151_D 139_I 0.91 0.00
33_S 370_E 0.91 0.00
57_L 97_N 0.91 0.00
226_E 385_A 0.91 0.00
132_A 227_T 0.91 0.00
63_Q 388_I 0.91 0.00
230_I 41_D 0.91 0.00
185_A 342_A 0.91 0.00
57_L 117_T 0.91 0.00
92_A 258_F 0.90 0.00
36_L 358_G 0.90 0.00
54_N 333_W 0.90 0.00
42_Q 347_A 0.90 0.00
43_L 329_G 0.90 0.00
181_V 70_G 0.90 0.00
70_I 372_V 0.90 0.00
36_L 144_M 0.90 0.00
223_T 57_I 0.90 0.00
189_G 25_A 0.90 0.00
181_V 21_G 0.89 0.00
150_I 85_L 0.89 0.00
58_T 374_M 0.89 0.00
176_N 229_E 0.89 0.00
30_D 296_D 0.89 0.00
41_A 303_Y 0.89 0.00
36_L 110_N 0.89 0.00
47_D 392_D 0.89 0.00
43_L 271_G 0.89 0.00
40_V 118_G 0.88 0.00
92_A 41_D 0.88 0.00
164_W 49_G 0.88 0.00
181_V 271_G 0.88 0.00
209_N 187_F 0.88 0.00
136_T 235_T 0.88 0.00
214_L 327_S 0.88 0.00
47_D 178_Y 0.88 0.00
149_T 360_L 0.87 0.00
80_I 401_L 0.87 0.00
65_S 336_T 0.87 0.00
67_V 116_L 0.87 0.00
43_L 196_M 0.87 0.00
207_R 301_G 0.87 0.00
73_L 13_A 0.87 0.00
151_D 169_P 0.87 0.00
57_L 398_L 0.86 0.00
62_A 371_L 0.86 0.00
205_V 75_V 0.86 0.00
40_V 273_N 0.86 0.00
69_G 397_T 0.85 0.00
105_T 166_T 0.85 0.00
109_A 357_N 0.85 0.00
89_S 374_M 0.85 0.00
174_A 139_I 0.85 0.00
94_N 107_N 0.85 0.00
49_T 140_P 0.85 0.00
230_I 48_V 0.85 0.00
64_I 18_D 0.85 0.00
80_I 375_I 0.84 0.00
92_A 396_N 0.84 0.00
36_L 366_D 0.84 0.00
73_L 372_V 0.84 0.00
40_V 283_Y 0.84 0.00
230_I 374_M 0.84 0.00
69_G 73_L 0.84 0.00
222_T 257_T 0.84 0.00
151_D 370_E 0.84 0.00
215_D 71_R 0.84 0.00
165_D 139_I 0.84 0.00
51_P 321_N 0.84 0.00
166_G 402_R 0.84 0.00
33_S 54_V 0.84 0.00
142_K 141_N 0.84 0.00
227_V 347_A 0.84 0.00
45_N 28_A 0.84 0.00
191_Q 145_A 0.83 0.00
70_I 13_A 0.83 0.00
161_S 259_S 0.83 0.00
91_Q 385_A 0.83 0.00
183_I 399_V 0.83 0.00
189_G 6_A 0.83 0.00
229_Q 110_N 0.83 0.00
69_G 387_T 0.83 0.00
69_G 7_V 0.83 0.00
41_A 317_A 0.83 0.00
73_L 31_G 0.83 0.00
43_L 210_V 0.82 0.00
230_I 393_Q 0.82 0.00
214_L 158_L 0.82 0.00
93_S 186_V 0.82 0.00
209_N 385_A 0.82 0.00
229_Q 28_A 0.82 0.00
47_D 389_K 0.82 0.00
203_Q 22_N 0.82 0.00
227_V 37_A 0.82 0.00
194_A 301_G 0.82 0.00
128_L 82_F 0.82 0.00
126_V 380_N 0.82 0.00
98_H 183_S 0.82 0.00
130_Q 357_N 0.82 0.00
32_Q 32_F 0.81 0.00
172_S 105_N 0.81 0.00
222_T 174_N 0.81 0.00
190_T 163_P 0.81 0.00
58_T 14_A 0.81 0.00
61_L 203_T 0.81 0.00
84_I 55_A 0.81 0.00
139_I 117_T 0.81 0.00
88_Q 371_L 0.81 0.00
65_S 260_L 0.81 0.00
104_G 134_P 0.81 0.00
49_T 102_L 0.81 0.00
47_D 331_N 0.80 0.00
210_S 260_L 0.80 0.00
139_I 180_K 0.80 0.00
69_G 402_R 0.80 0.00
170_D 394_I 0.80 0.00
94_N 77_I 0.80 0.00
34_S 6_A 0.80 0.00
149_T 261_S 0.80 0.00
120_T 106_R 0.80 0.00
183_I 20_I 0.80 0.00
188_G 147_K 0.80 0.00
58_T 331_N 0.80 0.00
205_V 201_V 0.80 0.00
37_T 21_G 0.80 0.00
220_G 171_S 0.80 0.00
205_V 43_F 0.80 0.00
178_S 355_L 0.80 0.00
88_Q 304_S 0.80 0.00
33_S 138_S 0.80 0.00
210_S 172_A 0.80 0.00
84_I 371_L 0.80 0.00
225_D 354_T 0.80 0.00
86_N 182_G 0.80 0.00
180_N 303_Y 0.80 0.00
189_G 235_T 0.79 0.00
43_L 88_S 0.79 0.00
50_N 392_D 0.79 0.00
131_A 277_A 0.79 0.00
70_I 329_G 0.79 0.00
33_S 401_L 0.79 0.00
187_N 103_D 0.79 0.00
69_G 391_Q 0.79 0.00
147_V 255_P 0.79 0.00
102_I 333_W 0.79 0.00
102_I 150_T 0.79 0.00
102_I 311_L 0.79 0.00
108_L 299_V 0.79 0.00
33_S 190_Q 0.79 0.00
169_T 42_M 0.79 0.00
222_T 290_S 0.79 0.00
174_A 232_A 0.79 0.00
98_H 202_K 0.79 0.00
172_S 279_T 0.78 0.00
202_V 110_N 0.78 0.00
229_Q 27_S 0.78 0.00
194_A 20_I 0.78 0.00
77_L 323_E 0.78 0.00
206_I 308_T 0.78 0.00
126_V 311_L 0.78 0.00
93_S 351_N 0.78 0.00
65_S 359_A 0.78 0.00
85_D 133_N 0.78 0.00
208_G 333_W 0.78 0.00
125_G 97_N 0.78 0.00
64_I 313_Q 0.78 0.00
190_T 150_T 0.78 0.00
215_D 139_I 0.78 0.00
63_Q 340_G 0.78 0.00
217_G 58_T 0.78 0.00
204_G 198_V 0.78 0.00
149_T 244_N 0.78 0.00
186_S 28_A 0.78 0.00
54_N 352_F 0.78 0.00
88_Q 372_V 0.78 0.00
181_V 359_A 0.78 0.00
221_T 301_G 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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