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OPENSEQ.org

IF1 - MAP1
UniProt: P69222 - P0AE18
Length: 336
Sequences: 556
Seq/Len: 1.74
I_Prob: 0.00

IF1 - Translation initiation factor IF-1
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IF1
MAP1 - Methionine aminopeptidase
Paralog alert: 0.96 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: AMPP MAP1 PEPQ YPDF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_V 190_E 1.06 0.00
46_R 18_G 0.98 0.00
50_G 179_E 0.97 0.00
55_V 21_A 0.92 0.00
46_R 249_T 0.91 0.00
40_M 133_L 0.90 0.00
68_V 157_V 0.85 0.00
69_F 133_L 0.82 0.00
63_S 226_K 0.81 0.00
32_V 73_I 0.80 0.00
32_V 187_D 0.79 0.00
63_S 242_D 0.79 0.00
34_A 200_T 0.78 0.00
27_E 138_R 0.77 0.00
42_K 207_V 0.76 0.00
46_R 163_S 0.76 0.00
68_V 200_T 0.76 0.00
13_V 240_V 0.76 0.00
27_E 240_V 0.75 0.00
43_N 21_A 0.75 0.00
14_L 143_G 0.75 0.00
23_R 25_L 0.75 0.00
50_G 246_E 0.74 0.00
27_E 12_E 0.74 0.00
36_I 234_Y 0.74 0.00
44_Y 214_I 0.73 0.00
58_T 59_C 0.73 0.00
31_V 173_I 0.73 0.00
13_V 119_T 0.72 0.00
10_Q 86_K 0.72 0.00
10_Q 194_V 0.71 0.00
69_F 14_M 0.71 0.00
36_I 37_S 0.70 0.00
6_N 157_V 0.70 0.00
71_S 133_L 0.70 0.00
63_S 149_I 0.69 0.00
40_M 245_C 0.69 0.00
14_L 40_E 0.69 0.00
55_V 226_K 0.68 0.00
23_R 11_I 0.68 0.00
16_T 183_V 0.67 0.00
43_N 173_I 0.66 0.00
39_K 42_D 0.66 0.00
27_E 153_I 0.66 0.00
57_L 45_C 0.66 0.00
27_E 195_L 0.66 0.00
43_N 134_Y 0.65 0.00
9_M 9_E 0.64 0.00
16_T 243_N 0.64 0.00
31_V 11_I 0.64 0.00
44_Y 23_E 0.64 0.00
12_T 28_I 0.63 0.00
2_A 16_V 0.62 0.00
4_E 230_L 0.62 0.00
20_T 243_N 0.62 0.00
16_T 239_V 0.62 0.00
69_F 62_Y 0.62 0.00
12_T 183_V 0.61 0.00
40_M 194_V 0.61 0.00
71_S 45_C 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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