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OPENSEQ.org

GNTX - HPF
UniProt: P46846 - P0AFX0
Length: 322
Sequences: 367
Seq/Len: 1.15
I_Prob: 0.05

GNTX - Protein GntX
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: GNTX
HPF - Ribosome hibernation promoting factor
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HPF RAIA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_I 57_N 1.52 0.05
116_I 12_I 1.44 0.04
192_I 55_H 1.33 0.03
203_V 3_L 1.30 0.03
202_T 9_N 1.28 0.03
119_V 32_D 1.24 0.03
149_W 23_K 1.24 0.02
154_V 25_A 1.23 0.02
201_S 58_G 1.21 0.02
197_V 31_F 1.18 0.02
65_V 78_I 1.18 0.02
67_V 11_E 1.15 0.02
181_L 30_Y 1.14 0.02
89_I 92_L 1.11 0.02
163_Q 15_A 1.10 0.02
166_L 27_L 1.09 0.01
93_L 36_Q 1.08 0.01
66_T 94_Q 1.07 0.01
75_S 76_G 1.06 0.01
217_A 91_K 1.04 0.01
131_F 9_N 1.04 0.01
165_F 92_L 1.03 0.01
186_Q 27_L 1.03 0.01
85_R 7_G 1.02 0.01
205_E 30_Y 1.01 0.01
187_G 79_D 1.01 0.01
67_V 19_F 1.01 0.01
226_T 26_K 1.00 0.01
217_A 25_A 1.00 0.01
125_R 74_I 1.00 0.01
187_G 50_S 0.99 0.01
221_W 11_E 0.99 0.01
131_F 52_A 0.98 0.01
179_F 13_T 0.98 0.01
201_S 77_L 0.97 0.01
206_I 75_D 0.97 0.01
199_T 50_S 0.97 0.01
131_F 15_A 0.97 0.01
73_P 60_E 0.94 0.01
182_E 14_E 0.94 0.01
157_T 73_A 0.94 0.01
131_F 41_L 0.94 0.01
179_F 75_D 0.93 0.01
133_Q 41_L 0.93 0.01
77_L 67_G 0.93 0.01
77_L 5_I 0.93 0.01
222_C 54_L 0.92 0.01
189_H 74_I 0.92 0.01
147_C 23_K 0.92 0.01
125_R 10_V 0.92 0.01
179_F 61_I 0.92 0.01
201_S 47_T 0.91 0.01
106_R 27_L 0.91 0.01
74_L 3_L 0.91 0.01
209_L 72_A 0.91 0.01
204_A 5_I 0.90 0.01
131_F 43_V 0.89 0.01
86_R 87_K 0.89 0.01
203_V 32_D 0.89 0.01
199_T 41_L 0.89 0.01
137_L 29_Q 0.89 0.01
79_H 72_A 0.88 0.01
85_R 12_I 0.88 0.01
93_L 91_K 0.88 0.01
173_R 14_E 0.88 0.01
79_H 23_K 0.88 0.01
96_L 67_G 0.88 0.01
208_Q 59_G 0.88 0.01
208_Q 51_D 0.87 0.01
9_W 5_I 0.87 0.01
181_L 25_A 0.87 0.01
132_N 31_F 0.87 0.01
74_L 67_G 0.87 0.01
137_L 87_K 0.86 0.01
185_V 16_L 0.86 0.01
121_L 89_K 0.86 0.01
132_N 20_V 0.86 0.01
173_R 2_Q 0.86 0.01
134_S 1_M 0.85 0.01
80_Q 27_L 0.85 0.01
221_W 74_I 0.85 0.01
74_L 69_D 0.85 0.01
137_L 14_E 0.85 0.01
74_L 68_Q 0.85 0.01
145_L 11_E 0.84 0.01
101_V 25_A 0.84 0.01
109_G 75_D 0.84 0.01
64_L 59_G 0.84 0.01
57_K 8_N 0.84 0.01
133_Q 85_L 0.83 0.01
196_V 30_Y 0.83 0.01
75_S 60_E 0.83 0.01
207_A 37_V 0.83 0.01
119_V 43_V 0.83 0.01
138_C 16_L 0.83 0.01
68_A 44_E 0.83 0.01
73_P 29_Q 0.82 0.01
157_T 17_R 0.82 0.01
75_S 71_Y 0.82 0.01
25_V 79_D 0.82 0.01
125_R 38_Y 0.82 0.01
81_L 69_D 0.82 0.01
196_V 56_V 0.82 0.01
72_P 3_L 0.81 0.01
81_L 75_D 0.81 0.01
70_Y 9_N 0.81 0.01
125_R 23_K 0.81 0.01
109_G 69_D 0.81 0.01
64_L 12_I 0.81 0.01
122_W 24_F 0.81 0.01
125_R 3_L 0.81 0.01
136_L 25_A 0.81 0.01
204_A 24_F 0.81 0.01
212_R 45_K 0.81 0.01
114_D 12_I 0.81 0.01
149_W 1_M 0.80 0.01
223_L 73_A 0.80 0.01
74_L 54_L 0.80 0.01
131_F 70_M 0.80 0.01
57_K 40_V 0.80 0.01
81_L 63_A 0.80 0.01
121_L 17_R 0.80 0.01
153_A 87_K 0.80 0.01
154_V 23_K 0.79 0.01
10_L 70_M 0.79 0.01
138_C 23_K 0.79 0.01
10_L 23_K 0.79 0.01
94_S 60_E 0.79 0.01
77_L 19_F 0.78 0.01
176_K 12_I 0.78 0.01
84_S 67_G 0.78 0.01
213_N 87_K 0.78 0.01
191_V 24_F 0.78 0.01
88_E 36_Q 0.78 0.01
15_L 91_K 0.78 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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