| UniProt: | P0AFX0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11681 | ||
| Length: | 95 (95) | ||
| Sequences: | 1266 | ||
| Seq/Len: | 13.33 |
| HPF
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: HPF RAIA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_G | 73_A | 3.985 | 1.00 | |
| 16_L | 70_M | 2.486 | 1.00 | |
| 41_L | 50_S | 2.39 | 1.00 | |
| 14_E | 18_E | 1.939 | 1.00 | |
| 20_V | 41_L | 1.854 | 1.00 | |
| 30_Y | 82_A | 1.793 | 1.00 | |
| 43_V | 48_H | 1.786 | 1.00 | |
| 7_G | 12_I | 1.715 | 1.00 | |
| 53_T | 62_H | 1.66 | 1.00 | |
| 52_A | 77_L | 1.658 | 1.00 | |
| 18_E | 22_A | 1.643 | 1.00 | |
| 83_R | 87_K | 1.615 | 1.00 | |
| 44_E | 49_T | 1.615 | 1.00 | |
| 24_F | 78_I | 1.593 | 1.00 | |
| 19_F | 74_I | 1.56 | 1.00 | |
| 41_L | 70_M | 1.529 | 1.00 | |
| 12_I | 17_R | 1.434 | 1.00 | |
| 37_V | 54_L | 1.431 | 1.00 | |
| 50_S | 73_A | 1.368 | 0.99 | |
| 49_T | 66_E | 1.367 | 0.99 | |
| 63_A | 84_Q | 1.342 | 0.99 | |
| 86_T | 90_D | 1.331 | 0.99 | |
| 48_H | 70_M | 1.314 | 0.99 | |
| 51_D | 62_H | 1.303 | 0.99 | |
| 29_Q | 82_A | 1.278 | 0.99 | |
| 70_M | 74_I | 1.274 | 0.99 | |
| 56_V | 85_L | 1.253 | 0.99 | |
| 47_T | 66_E | 1.243 | 0.98 | |
| 65_A | 76_G | 1.24 | 0.98 | |
| 31_F | 85_L | 1.212 | 0.98 | |
| 51_D | 80_K | 1.176 | 0.98 | |
| 56_V | 88_H | 1.168 | 0.97 | |
| 7_G | 13_T | 1.162 | 0.97 | |
| 27_L | 85_L | 1.16 | 0.97 | |
| 19_F | 72_A | 1.15 | 0.97 | |
| 55_H | 60_E | 1.144 | 0.97 | |
| 24_F | 52_A | 1.139 | 0.97 | |
| 22_A | 25_A | 1.121 | 0.97 | |
| 8_N | 42_K | 1.099 | 0.96 | |
| 13_T | 16_L | 1.099 | 0.96 | |
| 6_T | 40_V | 1.074 | 0.95 | |
| 67_G | 72_A | 1.065 | 0.95 | |
| 49_T | 64_S | 1.062 | 0.95 | |
| 39_V | 52_A | 1.062 | 0.95 | |
| 6_T | 38_Y | 1.061 | 0.95 | |
| 10_V | 71_Y | 1.058 | 0.95 | |
| 65_A | 80_K | 1.058 | 0.95 | |
| 87_K | 90_D | 1.057 | 0.95 | |
| 26_K | 79_D | 1.038 | 0.94 | |
| 63_A | 77_L | 1.033 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3v2cY | 1 | 1 | 100 | 0.059 | Contact Map | 0.734 |
| 3v26X | 1 | 1 | 100 | 0.071 | Contact Map | 0.521 |
| 3tqmA | 4 | 1 | 100 | 0.072 | Contact Map | 0.733 |
| 1imuA | 1 | 1 | 100 | 0.073 | Contact Map | 0.724 |
| 4fylA | 2 | 1 | 100 | 0.074 | Contact Map | 0.789 |
| 2ywqA | 4 | 1 | 99.9 | 0.102 | Contact Map | 0.916 |
| 1pu1A | 1 | 0.8 | 22.9 | 0.893 | Contact Map | 0.22 |
| 3r84A | 12 | 0.7368 | 16.7 | 0.9 | Contact Map | 0.267 |
| 3ux2A | 1 | 0.8 | 13.1 | 0.904 | Contact Map | 0.119 |
| 3ghgA | 4 | 0.9789 | 11.8 | 0.907 | Contact Map | 0.014 |
Sequence Conservation (Image Generated using WebLogo v3)