| UniProt: | P0AD49 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11151 | ||
| Length: | 113 (99) | ||
| Sequences: | 1112 | ||
| Seq/Len: | 11.23 |
| RAIA
Paralog alert: 0.27 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: HPF RAIA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_H | 73_A | 4.018 | 1.00 | |
| 41_L | 50_A | 2.312 | 1.00 | |
| 16_I | 70_M | 2.292 | 1.00 | |
| 18_Q | 22_D | 2.083 | 1.00 | |
| 30_W | 82_E | 2.068 | 1.00 | |
| 7_S | 12_I | 2.049 | 1.00 | |
| 20_V | 41_L | 1.928 | 1.00 | |
| 52_A | 77_L | 1.905 | 1.00 | |
| 83_R | 87_K | 1.814 | 1.00 | |
| 43_K | 48_F | 1.746 | 1.00 | |
| 24_L | 78_I | 1.723 | 1.00 | |
| 53_T | 62_V | 1.713 | 1.00 | |
| 41_L | 70_M | 1.676 | 1.00 | |
| 14_P | 18_Q | 1.66 | 1.00 | |
| 29_K | 82_E | 1.609 | 1.00 | |
| 19_H | 74_I | 1.557 | 1.00 | |
| 44_E | 49_V | 1.487 | 1.00 | |
| 70_M | 74_I | 1.408 | 1.00 | |
| 12_I | 17_R | 1.391 | 0.99 | |
| 56_T | 85_L | 1.34 | 0.99 | |
| 19_H | 72_T | 1.33 | 0.99 | |
| 65_G | 76_E | 1.318 | 0.99 | |
| 49_V | 66_K | 1.297 | 0.99 | |
| 48_F | 70_M | 1.294 | 0.99 | |
| 13_T | 16_I | 1.262 | 0.99 | |
| 86_N | 90_H | 1.249 | 0.99 | |
| 51_D | 62_V | 1.24 | 0.98 | |
| 10_M | 70_M | 1.238 | 0.98 | |
| 7_S | 13_T | 1.228 | 0.98 | |
| 63_A | 77_L | 1.221 | 0.98 | |
| 10_M | 71_Y | 1.215 | 0.98 | |
| 51_D | 80_K | 1.208 | 0.98 | |
| 47_G | 66_K | 1.198 | 0.98 | |
| 6_T | 40_I | 1.182 | 0.98 | |
| 17_R | 21_A | 1.177 | 0.98 | |
| 5_I | 12_I | 1.16 | 0.97 | |
| 26_K | 79_N | 1.125 | 0.97 | |
| 85_L | 94_A | 1.112 | 0.96 | |
| 22_D | 25_A | 1.1 | 0.96 | |
| 24_L | 52_A | 1.098 | 0.96 | |
| 11_E | 95_R | 1.095 | 0.96 | |
| 21_A | 24_L | 1.094 | 0.96 | |
| 87_K | 90_H | 1.073 | 0.95 | |
| 73_A | 81_L | 1.064 | 0.95 | |
| 67_H | 72_T | 1.04 | 0.94 | |
| 15_A | 71_Y | 1.039 | 0.94 | |
| 6_T | 38_H | 1.038 | 0.94 | |
| 49_V | 64_S | 1.03 | 0.94 | |
| 37_P | 54_I | 1.014 | 0.93 | |
| 56_T | 88_L | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3v2cY | 1 | 1 | 100 | 0.12 | Contact Map | 0.662 |
| 1imuA | 1 | 0.9469 | 100 | 0.198 | Contact Map | 0.702 |
| 3tqmA | 4 | 0.8496 | 100 | 0.213 | Contact Map | 0.715 |
| 4fylA | 2 | 0.8407 | 100 | 0.222 | Contact Map | 0.739 |
| 3v26X | 1 | 0.8938 | 100 | 0.223 | Contact Map | 0.444 |
| 2ywqA | 4 | 0.8761 | 99.9 | 0.232 | Contact Map | 0.882 |
| 3ku7A | 2 | 0.4956 | 15.5 | 0.917 | Contact Map | 0.486 |
| 1pu1A | 1 | 0.6726 | 15.1 | 0.917 | Contact Map | 0.223 |
| 3ghgA | 4 | 0.9912 | 14.4 | 0.918 | Contact Map | 0.209 |
| 1deqA | 4 | 0.9912 | 11.9 | 0.921 | Contact Map | 0.042 |
Sequence Conservation (Image Generated using WebLogo v3)