May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

YHBO - YHBW
UniProt: P45470 - P0ADV5
Length: 507
Sequences: 368
Seq/Len: 0.74
I_Prob: 0.00

YHBO - Protein YhbO
Paralog alert: 0.67 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: YAJL YHBO
YHBW - Uncharacterized protein YhbW
Paralog alert: 0.65 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: RUTA SSUD YHBW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
87_V 291_V 1.10 0.00
111_I 300_R 1.07 0.00
90_T 173_S 1.03 0.00
69_L 63_L 1.00 0.00
131_V 73_T 0.99 0.00
168_R 110_L 0.92 0.00
167_L 165_I 0.89 0.00
147_K 74_L 0.89 0.00
6_A 300_R 0.86 0.00
106_G 213_A 0.84 0.00
42_T 37_E 0.84 0.00
105_H 291_V 0.82 0.00
67_D 229_A 0.80 0.00
112_S 69_A 0.79 0.00
25_F 261_I 0.79 0.00
36_E 309_V 0.78 0.00
58_I 98_L 0.78 0.00
8_L 36_A 0.77 0.00
106_G 73_T 0.76 0.00
123_A 32_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0289 seconds.