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OPENSEQ.org
HOFB - HOFC
UniProt: P36645 - P36646
Length: 861
Sequences: 1344
Seq/Len: 1.59
I_Prob: 0.02
HOFB - Protein transport protein HofB homolog
Paralog alert: 0.54 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: GSPE HOFB 		HOFC - Protein transport protein HofC homolog
Paralog alert: 0.38 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: GSPF HOFC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
245_N 176_V 1.30 0.02
289_M 385_M 1.30 0.02
313_L 206_I 1.24 0.02
172_L 73_A 1.17 0.01
306_A 375_G 1.10 0.01
179_K 188_F 1.10 0.01
245_N 87_Q 1.08 0.01
289_M 206_I 1.07 0.01
359_R 207_M 1.04 0.01
85_L 333_T 1.03 0.01
140_L 245_Q 1.02 0.01
300_E 94_Q 1.02 0.01
245_N 188_F 1.00 0.01
28_A 93_W 1.00 0.01
304_K 64_I 0.98 0.01
304_K 393_G 0.98 0.01
179_K 176_V 0.98 0.01
304_K 149_Q 0.97 0.01
159_E 25_A 0.94 0.01
276_V 169_I 0.94 0.01
344_L 386_Y 0.93 0.01
179_K 83_L 0.93 0.01
400_E 9_W 0.91 0.01
115_I 86_E 0.91 0.01
341_A 338_G 0.91 0.01
408_I 89_P 0.91 0.01
140_L 76_T 0.91 0.01
288_I 62_E 0.90 0.01
179_K 390_F 0.90 0.01
261_N 188_F 0.90 0.01
179_K 386_Y 0.90 0.01
307_Q 142_C 0.89 0.01
115_I 372_I 0.89 0.01
320_S 273_T 0.89 0.01
263_T 188_F 0.89 0.01
276_V 106_Q 0.88 0.01
277_L 378_I 0.87 0.01
137_L 79_E 0.87 0.01
96_R 196_N 0.86 0.01
341_A 323_F 0.86 0.01
266_H 388_P 0.86 0.01
454_V 316_A 0.86 0.01
333_V 206_I 0.86 0.01
440_A 330_L 0.85 0.01
263_T 276_A 0.85 0.01
339_S 255_G 0.85 0.01
290_I 217_S 0.85 0.01
245_N 203_T 0.85 0.01
260_L 380_T 0.84 0.01
433_L 92_Q 0.84 0.01
102_I 374_T 0.84 0.01
261_N 83_L 0.84 0.01
156_F 324_S 0.84 0.01
245_N 388_P 0.83 0.01
256_P 60_S 0.83 0.01
172_L 367_E 0.83 0.01
259_G 173_A 0.83 0.01
182_L 99_S 0.83 0.01
115_I 212_F 0.82 0.01
179_K 388_P 0.82 0.01
259_G 382_V 0.82 0.01
428_A 236_R 0.81 0.01
424_H 54_Q 0.81 0.01
245_N 384_A 0.81 0.01
347_A 127_A 0.81 0.01
454_V 267_F 0.80 0.01
158_V 125_Y 0.80 0.01
184_L 111_S 0.80 0.01
283_Q 145_L 0.80 0.01
218_V 163_L 0.80 0.01
137_L 25_A 0.79 0.01
163_N 100_L 0.79 0.01
453_R 360_D 0.79 0.01
316_L 156_T 0.79 0.01
148_H 380_T 0.79 0.01
271_L 378_I 0.79 0.01
141_G 201_A 0.78 0.01
425_A 183_F 0.78 0.01
393_Y 196_N 0.78 0.01
138_K 368_P 0.78 0.01
411_L 328_L 0.78 0.01
368_I 82_A 0.78 0.01
330_Q 386_Y 0.78 0.01
107_N 23_L 0.78 0.00
155_Q 264_T 0.77 0.00
330_Q 390_F 0.77 0.00
85_L 272_L 0.77 0.00
400_E 273_T 0.77 0.00
346_I 132_G 0.77 0.00
170_A 192_Y 0.77 0.00
192_L 277_G 0.76 0.00
331_M 69_T 0.76 0.00
231_T 349_H 0.76 0.00
434_F 75_L 0.76 0.00
98_S 343_M 0.76 0.00
155_Q 279_T 0.76 0.00
259_G 390_F 0.76 0.00
30_V 373_I 0.76 0.00
242_A 394_D 0.76 0.00
249_V 359_A 0.76 0.00
229_T 352_R 0.75 0.00
143_L 9_W 0.75 0.00
266_H 158_K 0.75 0.00
290_I 207_M 0.75 0.00
140_L 56_R 0.75 0.00
111_I 89_P 0.75 0.00
139_V 176_V 0.75 0.00
412_I 135_T 0.75 0.00
144_D 139_D 0.75 0.00
307_Q 161_S 0.75 0.00
455_L 271_A 0.75 0.00
436_N 386_Y 0.74 0.00
156_F 122_P 0.74 0.00
137_L 27_S 0.74 0.00
276_V 386_Y 0.74 0.00
145_I 335_E 0.74 0.00
245_N 180_M 0.74 0.00
428_A 42_P 0.73 0.00
212_Q 250_R 0.73 0.00
89_L 122_P 0.73 0.00
182_L 41_T 0.73 0.00
290_I 118_S 0.73 0.00
454_V 271_A 0.73 0.00
336_W 169_I 0.73 0.00
269_A 160_K 0.73 0.00
199_M 273_T 0.73 0.00
201_P 373_I 0.73 0.00
437_G 72_K 0.73 0.00
448_F 254_M 0.73 0.00
145_I 121_F 0.73 0.00
306_A 188_F 0.72 0.00
143_L 125_Y 0.72 0.00
179_K 329_Q 0.72 0.00
447_T 301_T 0.72 0.00
398_L 30_L 0.72 0.00
261_N 329_Q 0.72 0.00
431_R 224_G 0.72 0.00
213_Q 122_P 0.72 0.00
145_I 133_E 0.72 0.00
49_I 73_A 0.72 0.00
301_I 378_I 0.72 0.00
392_F 378_I 0.72 0.00
135_A 40_V 0.72 0.00
320_S 314_W 0.72 0.00
342_L 100_L 0.71 0.00
133_L 327_C 0.71 0.00
85_L 324_S 0.71 0.00
377_L 373_I 0.71 0.00
139_V 100_L 0.71 0.00
323_E 273_T 0.71 0.00
447_T 291_M 0.71 0.00
10_C 276_A 0.71 0.00
306_A 18_A 0.71 0.00
88_T 258_M 0.71 0.00
18_L 7_W 0.71 0.00
94_E 371_L 0.71 0.00
138_K 165_Y 0.71 0.00
306_A 350_H 0.71 0.00
288_I 273_T 0.71 0.00
211_L 155_L 0.71 0.00
140_L 189_A 0.70 0.00
453_R 316_A 0.70 0.00
82_A 350_H 0.70 0.00
399_F 210_A 0.70 0.00
215_Q 273_T 0.70 0.00
109_Y 286_S 0.70 0.00
304_K 125_Y 0.70 0.00
165_V 113_A 0.70 0.00
121_P 124_L 0.69 0.00
178_E 368_P 0.69 0.00
135_A 393_G 0.69 0.00
102_I 112_N 0.69 0.00
179_K 87_Q 0.69 0.00
333_V 314_W 0.69 0.00
204_L 375_G 0.69 0.00
221_T 375_G 0.69 0.00
430_M 316_A 0.69 0.00
306_A 379_G 0.69 0.00
447_T 120_V 0.69 0.00
210_A 303_I 0.69 0.00
242_A 267_F 0.69 0.00
344_L 393_G 0.69 0.00
137_L 127_A 0.69 0.00
325_L 251_I 0.69 0.00
233_Y 375_G 0.68 0.00
272_T 378_I 0.68 0.00
182_L 31_L 0.68 0.00
115_I 177_V 0.68 0.00
255_I 393_G 0.68 0.00
289_M 168_I 0.68 0.00
180_V 249_L 0.68 0.00
278_R 378_I 0.68 0.00
128_D 128_M 0.68 0.00
218_V 108_I 0.68 0.00
290_I 222_L 0.68 0.00
128_D 35_L 0.68 0.00
88_T 39_M 0.68 0.00
427_Q 220_L 0.68 0.00
23_E 44_S 0.67 0.00
240_N 63_V 0.67 0.00
432_T 305_H 0.67 0.00
167_F 73_A 0.67 0.00
16_V 57_G 0.67 0.00
303_I 84_L 0.67 0.00
89_L 396_M 0.67 0.00
134_T 7_W 0.67 0.00
30_V 163_L 0.67 0.00
427_Q 7_W 0.67 0.00
273_F 368_P 0.67 0.00
265_I 219_L 0.67 0.00
78_H 35_L 0.67 0.00
263_T 262_K 0.67 0.00
88_T 111_S 0.67 0.00
346_I 125_Y 0.67 0.00
396_T 365_L 0.67 0.00
217_L 189_A 0.67 0.00
336_W 31_L 0.67 0.00
272_T 158_K 0.67 0.00
281_L 66_Q 0.66 0.00
182_L 114_L 0.66 0.00
426_R 220_L 0.66 0.00
137_L 257_L 0.66 0.00
442_E 104_L 0.66 0.00
129_A 31_L 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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