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OPENSEQ.org

ALSE - DEF
UniProt: P32719 - P0A6K3
Length: 400
Sequences: 334
Seq/Len: 0.90
I_Prob: 0.00

ALSE - D-allulose-6-phosphate 3-epimerase
Paralog alert: 0.20 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ALSE RPE SGCE
DEF - Peptide deformylase
Paralog alert: 0.44 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: DEF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
172_V 63_V 1.25 0.00
206_I 37_E 1.20 0.00
201_N 143_F 1.08 0.00
3_I 102_P 1.06 0.00
171_E 13_R 1.04 0.00
51_Q 61_I 1.00 0.00
184_L 24_V 0.97 0.00
28_Y 94_I 0.94 0.00
84_I 113_D 0.94 0.00
43_T 114_R 0.92 0.00
41_N 143_F 0.92 0.00
171_E 33_D 0.89 0.00
209_A 24_V 0.89 0.00
180_T 144_M 0.89 0.00
71_D 96_E 0.88 0.00
155_A 115_D 0.88 0.00
52_V 69_E 0.87 0.00
90_T 59_I 0.87 0.00
103_R 139_V 0.86 0.00
170_I 86_G 0.86 0.00
145_P 36_F 0.85 0.00
14_K 20_P 0.85 0.00
169_E 61_I 0.85 0.00
190_D 55_H 0.84 0.00
105_H 21_V 0.82 0.00
66_V 116_G 0.81 0.00
3_I 86_G 0.80 0.00
145_P 6_V 0.80 0.00
41_N 116_G 0.80 0.00
210_W 100_L 0.79 0.00
199_L 131_I 0.79 0.00
18_Q 23_E 0.78 0.00
167_E 139_V 0.78 0.00
66_V 135_M 0.78 0.00
108_K 42_E 0.78 0.00
206_I 106_K 0.78 0.00
108_K 13_R 0.78 0.00
27_D 9_I 0.77 0.00
158_K 146_Y 0.77 0.00
66_V 58_I 0.77 0.00
33_I 145_D 0.76 0.00
155_A 42_E 0.76 0.00
77_A 52_V 0.76 0.00
189_A 129_I 0.75 0.00
136_T 97_Q 0.75 0.00
22_I 58_I 0.74 0.00
96_F 72_V 0.74 0.00
158_K 115_D 0.73 0.00
42_L 16_K 0.73 0.00
100_D 110_R 0.73 0.00
210_W 115_D 0.73 0.00
37_H 18_A 0.73 0.00
191_V 117_K 0.72 0.00
204_E 96_E 0.72 0.00
86_L 117_K 0.72 0.00
210_W 29_Q 0.72 0.00
169_E 52_V 0.72 0.00
198_G 79_L 0.71 0.00
136_T 94_I 0.71 0.00
181_Y 7_L 0.71 0.00
23_D 8_H 0.70 0.00
184_L 59_I 0.70 0.00
180_T 104_A 0.70 0.00
197_S 113_D 0.70 0.00
197_S 82_S 0.70 0.00
176_C 97_Q 0.70 0.00
104_R 56_Q 0.70 0.00
198_G 78_L 0.69 0.00
165_G 34_D 0.69 0.00
165_G 122_E 0.69 0.00
123_K 43_E 0.69 0.00
42_L 78_L 0.69 0.00
84_I 117_K 0.68 0.00
112_I 121_L 0.68 0.00
36_G 60_V 0.68 0.00
151_L 12_E 0.68 0.00
125_Y 22_E 0.68 0.00
128_K 150_L 0.68 0.00
60_L 60_V 0.68 0.00
154_L 50_T 0.68 0.00
27_D 116_G 0.67 0.00
152_D 55_H 0.67 0.00
101_E 10_P 0.67 0.00
66_V 127_L 0.67 0.00
110_G 98_R 0.67 0.00
108_K 5_Q 0.67 0.00
183_K 52_V 0.67 0.00
22_I 21_V 0.67 0.00
155_A 41_A 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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