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OPENSEQ.org

PABC - RL32
UniProt: P28305 - P0A7N4
Length: 326
Sequences: 238
Seq/Len: 0.74
I_Prob: 0.00

PABC - Aminodeoxychorismate lyase
Paralog alert: 0.66 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ILVE PABC
RL32 - 50S ribosomal protein L32
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL32
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_T 39_L 1.42 0.00
163_L 52_R 1.40 0.00
21_F 8_P 1.37 0.00
157_T 43_I 1.28 0.00
200_I 9_T 1.26 0.00
152_S 37_K 1.20 0.00
132_R 43_I 1.16 0.00
106_V 26_T 1.10 0.00
94_T 48_Y 1.10 0.00
260_Y 9_T 1.06 0.00
216_L 21_A 1.06 0.00
63_L 46_D 1.06 0.00
67_M 7_K 1.04 0.00
215_Q 21_A 1.00 0.00
257_L 52_R 1.00 0.00
45_R 16_R 0.98 0.00
78_V 42_H 0.98 0.00
139_I 28_L 0.98 0.00
232_M 7_K 0.97 0.00
112_H 45_A 0.97 0.00
244_V 6_N 0.97 0.00
27_T 16_R 0.95 0.00
58_D 48_Y 0.95 0.00
127_P 21_A 0.95 0.00
172_T 43_I 0.95 0.00
249_D 33_T 0.95 0.00
264_L 26_T 0.94 0.00
230_D 39_L 0.94 0.00
193_D 26_T 0.94 0.00
168_E 9_T 0.94 0.00
252_F 48_Y 0.93 0.00
116_L 34_S 0.93 0.00
93_S 53_K 0.92 0.00
45_R 29_S 0.91 0.00
261_L 50_R 0.91 0.00
264_L 9_T 0.89 0.00
54_M 7_K 0.89 0.00
233_V 7_K 0.89 0.00
56_S 26_T 0.88 0.00
184_G 50_R 0.88 0.00
104_L 24_A 0.88 0.00
139_I 39_L 0.88 0.00
50_C 56_A 0.87 0.00
202_R 11_S 0.87 0.00
228_Q 5_Q 0.87 0.00
177_A 34_S 0.86 0.00
236_N 6_N 0.86 0.00
39_L 7_K 0.85 0.00
232_M 54_V 0.85 0.00
247_C 7_K 0.85 0.00
147_Q 10_R 0.85 0.00
101_T 12_K 0.84 0.00
7_H 9_T 0.84 0.00
201_M 50_R 0.84 0.00
163_L 55_I 0.84 0.00
48_D 48_Y 0.84 0.00
230_D 7_K 0.83 0.00
121_I 9_T 0.83 0.00
233_V 12_K 0.83 0.00
216_L 28_L 0.82 0.00
186_V 26_T 0.82 0.00
177_A 31_D 0.82 0.00
79_L 28_L 0.81 0.00
253_S 43_I 0.81 0.00
139_I 14_G 0.81 0.00
249_D 9_T 0.81 0.00
30_R 6_N 0.81 0.00
246_A 48_Y 0.80 0.00
246_A 37_K 0.80 0.00
99_P 48_Y 0.80 0.00
252_F 37_K 0.80 0.00
40_S 7_K 0.80 0.00
243_P 21_A 0.80 0.00
152_S 52_R 0.79 0.00
228_Q 33_T 0.79 0.00
151_R 52_R 0.79 0.00
151_R 11_S 0.79 0.00
213_S 56_A 0.79 0.00
197_V 22_L 0.78 0.00
173_E 10_R 0.78 0.00
238_L 30_V 0.78 0.00
45_R 31_D 0.78 0.00
161_E 5_Q 0.78 0.00
171_V 37_K 0.78 0.00
240_P 8_P 0.78 0.00
91_G 20_D 0.78 0.00
12_L 24_A 0.78 0.00
155_E 50_R 0.77 0.00
115_R 55_I 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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