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OPENSEQ.org

TATD - YGJH
UniProt: P27859 - P42589
Length: 370
Sequences: 306
Seq/Len: 0.85
I_Prob: 0.00

TATD - Tat-linked quality control protein TatD
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TATD YCFH YJJV
YGJH - tRNA-binding protein YgjH
Paralog alert: 0.30 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YGJH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
196_E 57_E 1.07 0.00
149_A 25_H 1.06 0.00
198_L 66_L 1.05 0.00
2_F 18_K 1.03 0.00
2_F 47_T 1.02 0.00
8_L 22_V 1.01 0.00
171_I 17_G 0.99 0.00
172_G 29_D 0.98 0.00
229_I 93_E 0.95 0.00
119_D 57_E 0.94 0.00
4_I 93_E 0.93 0.00
61_V 34_V 0.92 0.00
223_P 22_V 0.92 0.00
155_T 86_A 0.91 0.00
154_F 88_T 0.90 0.00
2_F 64_V 0.89 0.00
164_C 45_T 0.89 0.00
161_M 23_K 0.88 0.00
14_A 78_T 0.88 0.00
64_H 15_R 0.87 0.00
130_D 7_A 0.87 0.00
2_F 104_P 0.87 0.00
156_G 33_I 0.86 0.00
35_T 25_H 0.86 0.00
89_I 6_Y 0.86 0.00
245_A 14_M 0.86 0.00
164_C 34_V 0.85 0.00
136_M 10_A 0.85 0.00
211_D 32_Y 0.84 0.00
118_A 105_A 0.82 0.00
186_L 12_L 0.82 0.00
156_G 50_V 0.82 0.00
212_L 83_L 0.81 0.00
204_A 56_E 0.80 0.00
54_S 74_M 0.80 0.00
27_A 22_V 0.80 0.00
244_L 88_T 0.80 0.00
51_Q 83_L 0.80 0.00
20_V 34_V 0.79 0.00
143_L 19_I 0.79 0.00
238_G 52_Y 0.78 0.00
151_L 92_S 0.77 0.00
6_V 108_R 0.77 0.00
139_L 64_V 0.76 0.00
4_I 75_R 0.76 0.00
177_V 19_I 0.75 0.00
47_K 102_M 0.75 0.00
101_S 70_Q 0.75 0.00
87_V 32_Y 0.75 0.00
171_I 97_L 0.74 0.00
4_I 28_A 0.74 0.00
227_P 36_V 0.74 0.00
64_H 6_Y 0.74 0.00
101_S 28_A 0.73 0.00
35_T 17_G 0.73 0.00
154_F 36_V 0.73 0.00
150_V 91_G 0.72 0.00
189_L 5_A 0.72 0.00
120_L 44_Q 0.72 0.00
174_T 93_E 0.72 0.00
179_D 80_E 0.71 0.00
139_L 12_L 0.71 0.00
76_A 35_Q 0.71 0.00
101_S 29_D 0.70 0.00
241_A 19_I 0.70 0.00
169_I 93_E 0.70 0.00
83_Q 19_I 0.69 0.00
3_D 58_L 0.69 0.00
42_S 105_A 0.69 0.00
185_E 57_E 0.69 0.00
153_C 92_S 0.69 0.00
114_L 100_E 0.69 0.00
168_G 86_A 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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